Gene Xfasm12_1060 details

Gene Information

• Locus tag: Xfasm12_1060
• Symbol: ruvC
• ID: 6120685
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 1146236
• End bp: 1146781
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641649085
• Product: Holliday junction resolvase
• Protein accession: YP_001775649
• Protein GI: 170730216
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTCTC GTATCGCTTA TCAGATGACG CGTATCCTCG GTATTGATCC TGGATCACAG 
CGCACTGGAG TTGGTGTCAT TGATGTCGAT GAGTATGGAT GTAGCCACCA TGTCTACCAT 
GCACCATTGG TACTACTAGG TCAGAGTAGT TTTGCGGGGC GGCTGAAGCA GTTGTTGTTG 
GGTCTGAGCG CAGTGATTGA GGAGTACAGC CCAAAGGAAG TGGCCATTGA GAAGGTGTTT 
ATGTCTAAAA ATGCTGACTC AGCACTTAAG CTTGGTCAGG CGCGCGGTGT GGCAATCAGT 
GCGGTAGTGC TACGTGATTT ACCTGTGCAT GAGTACGCTG CTAGGCAAAT CAAACTGGCT 
GTGGTTGGTC GCGGTGGTGC CGACAAGCAA CAGATCCAGC ATATGGTTGG TGTCATGCTG 
AATCTGCAAG GTAGGTTACA GTCTGATGCA GCAGATGCAT TGGCGGTCGC TATCACGCAT 
GCTCATGTGA GTGCTACTGC GCAGCACTTA GGTGTCAGTA CGAAGCAGGC GTGGAGCCGG 
AAATGA 

 

Protein sequence

MSSRIAYQMT RILGIDPGSQ RTGVGVIDVD EYGCSHHVYH APLVLLGQSS FAGRLKQLLL 
GLSAVIEEYS PKEVAIEKVF MSKNADSALK LGQARGVAIS AVVLRDLPVH EYAARQIKLA 
VVGRGGADKQ QIQHMVGVML NLQGRLQSDA ADALAVAITH AHVSATAQHL GVSTKQAWSR 
K