| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1013 |
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| Symbol | glyS |
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| ID | 6121497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1093679 |
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| End bp | 1095847 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641649044 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001775608 |
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| Protein GI | 170730175 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.40504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC TAAAACCACT GCTGATCGAA CTTGGGACCG AGGAATTGCC GGTCAATGCT
TTGCCGAGCT TGTCGCGAGC ATTTTTCGAG GGGGTGCTGG CTGGGTTGGA GAGGCGCGGC
ATTGTGATCG ATCATGGTGA GGCCAAGTCT CTGTCGACTC CGCGTCGGCT TGCTGTGTTA
CTCACGGCTG TGGCAGTGGA GCAGCCAAAG CAGTATCGCG AATTGTTTGG CCCTTATCTG
AATACCGCGT TTGATACCGA AGGTAAGCCC ACGAAAGCGT TGGAGGGATT TGCTGCTAAA
TGTGGTGTCA ATTGGAGGAC ATTGGAGCGT ATTCGTGATA CCAAGGGCGA GCGTTTCGTA
CATCGGGTGG TGGTGCCTGG CGAGCGTACG GATGCGTTGT TGCCAGGAAT ATTGACTGAA
GCAATTGCGG GGATGCCTAT TCCCAAGCCG ATGCGCTGGG GTGCTCATGA ATATCTATTT
GCACGTCCAG TCCATTGGTT GGTGATGCTT TTTGGGCAGG ATGTGGTTGA GGCTGAGATC
ATGGGGGTGA AGGCTGGTCG TATCAGTCGT GGTCATCGCT TTTTGTATGA CAAGCCGGTG
TCGCTGAGTG ATCCGCAGAA TTACATTGAT GTTCTTCAGG CTGCGTATGT GTTGGTGGAT
CCTGCCGCAC GTCGTGCTCG CATTGTTGCT GAGATTGAGG CCGTAGCGCG TCAGGTTGGT
GGAGTCGCGC GGATCACTGA AGATAATGTG GCGCAGGTGG TGAATTTGGT GGAATGGCCG
TCGGCGGTGC TATGTAGCTT CGAGCGTGTG TTTCTTGAAG TGCCACAGGA GGCGTTGATC
CAAACAATGG AGGTGAATCA GAAATTTTTT CCTGTACTCG ATAGTTTGGG GAAGTTGACT
GAGAAGTTCA TCGGTATTGC CAATATTGAG TCCAATGATG TCGCTGAGGT CGCAAAGGGC
TATGAACGTG TGATCCGTCC GCGTTTTTCT GATGCTAAGT TTTTCTTCAA TGAGGATCTC
AAGCAAGGTT TGAAGGCAAT GGGGGAGCGA CTAAGGACGG TCACCTATCA TGCGAAGTTA
GGTACGCTGG CTGACAAGGT TGCGCGAGTT CTGGTACTGG CTGAAGCGAT TGCGCCACAG
ATTGGGGTAG ATCCATTGCT TGCCAGGCGT GTTGCGTTGC TCAGTAAAAA CGACTTGCAA
TCTCGCATGG TCAATGAGTT TCCGGAATTG CAGGGAGTTG CGGGTCATCA CTATGCCTTG
ATTAGTGGTG AGTTACCCGA GGTCGCAATG GCGATTGAGG ATGCTTATCG GCCTCGCTTT
TCTGGTGATG AGATCGCACG TTCGCCGTTG GGTAAGGTGC TCGGACTCGC CGAGCGTCTG
GATACGCTGG CGTGTGGTTT TGCTGTGGGA ATGAAGCCAA CTGGTAACAA GGATCCTTTT
GGGTTACGCC GCAATGCGTT GGGATTGGCA AGAACAATTA TTGAGAGTCG GTTCGATCTG
GATTTAAAAG TGCTACTGGA TCAAGCGTCA GACTGGGTCG CGTTTGCGAC GACGATTGAG
CAGGAGCGTC ATGCACAGGA ATCAGTGAAA CAGTCGAAAA AAGAAGCGGC TGTTAAGCAT
TCACTGCCCC AGGTCAGTGA TGAGAAATCT GCAAGAATTG AAGAGCTTTA CGATTTCATC
GTAGAGCGTT TGCGTGGTTA CTATGCGGAT AAGGGCATTC CAACAACGCA CTTTAATGCA
GTCGCTGAGC TTAAACCTGT CTCTTTATAC GATTTTCATC GCCGTCTTGA TGCAATCGGC
AGATTTGCTG CTCTTCCAGA GGCAGAGGCG CTGGCAGTTG CCAACAAGCG TATCCGTAAT
ATTTTGCGTA AGGCTGAAAT TAAGATTCCA GCATCAGTCG ATGCGACATT GTTCGATCAA
CCAGCAGAGA GCGGGTTACT CGTGGCGTTG GAAGGTGTGA TTACCGATAC CCGCAGTGCA
TTAGATTGCA AAAATTATGT CAGTGTCCTT ACATGTCTGG CACGGTTACG GCCACCCATT
GATGAGTTCT TCGACAAGGT GATGGTTAAC GATGAAAATT TGATGCTGCG TGCTAACCGC
TTAGCGTTAC TGCAACGCTT AGGGGAGTAT CTGTGTTGTG TTGCGGCCAT TGAACACTTG
TCTAATTGA
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| Protein sequence | MTELKPLLIE LGTEELPVNA LPSLSRAFFE GVLAGLERRG IVIDHGEAKS LSTPRRLAVL
LTAVAVEQPK QYRELFGPYL NTAFDTEGKP TKALEGFAAK CGVNWRTLER IRDTKGERFV
HRVVVPGERT DALLPGILTE AIAGMPIPKP MRWGAHEYLF ARPVHWLVML FGQDVVEAEI
MGVKAGRISR GHRFLYDKPV SLSDPQNYID VLQAAYVLVD PAARRARIVA EIEAVARQVG
GVARITEDNV AQVVNLVEWP SAVLCSFERV FLEVPQEALI QTMEVNQKFF PVLDSLGKLT
EKFIGIANIE SNDVAEVAKG YERVIRPRFS DAKFFFNEDL KQGLKAMGER LRTVTYHAKL
GTLADKVARV LVLAEAIAPQ IGVDPLLARR VALLSKNDLQ SRMVNEFPEL QGVAGHHYAL
ISGELPEVAM AIEDAYRPRF SGDEIARSPL GKVLGLAERL DTLACGFAVG MKPTGNKDPF
GLRRNALGLA RTIIESRFDL DLKVLLDQAS DWVAFATTIE QERHAQESVK QSKKEAAVKH
SLPQVSDEKS ARIEELYDFI VERLRGYYAD KGIPTTHFNA VAELKPVSLY DFHRRLDAIG
RFAALPEAEA LAVANKRIRN ILRKAEIKIP ASVDATLFDQ PAESGLLVAL EGVITDTRSA
LDCKNYVSVL TCLARLRPPI DEFFDKVMVN DENLMLRANR LALLQRLGEY LCCVAAIEHL
SN
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