Gene Xfasm12_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0960 
Symbol 
ID6121444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand- 
Start bp1039558 
End bp1040205 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content53% 
IMG OID641648999 
Productribose-5-phosphate isomerase A 
Protein accessionYP_001775563 
Protein GI170730130 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0969642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAG CAAAACGGCG CGCCGCCGAA AAGGCCATAG AATACGTCGA GAACGATATG 
ATTATCGGCG TCGGCACCGG CTCAACAGTC GCCTACTTCA TCGACGCACT AGGACGCACC 
CCAAAACGCA TCAAAGGTGC AGTATCCAGC TCCGAACAGA GCACAGCACA TTTAAAACAA 
CACGGAATTG AGGTCCTGGA ACTCAATCAT ACCGGCACAC TCCCACTCTA TGTGGACGGT 
GCAGACGAGT GCGACCCGTA CAAACGCCTT ATCAAAGGAG GCGGCGCATC ATTAACACGC 
GAGAAGATCA TCGCTGAAGC AAGCAAACAA TTCATTTGTA TCATCGACCC AAACAAACAG 
GTAGCAACAC TAGGCAAGTT CCCACTACCC ATCGAAGTGA TCCCAATGGC ACGCAGCTTG 
GTTGCAAGGC AAATCATGGC ACGTACCGAC GGTCAACCAG TATGGCGTGA AGGGGTCATT 
ACCGATAACG GCAACGTTAT CCTGGATGTA CATCACTTAT GCATCACCGA CCCGGTAAAG 
CTAGAGCAAG AACTCAATCA AATCCCAGGG GTCGTCTGCG TCGGCCTGTT CGCCCGTCGC 
TGTGCGGACC TAGTTATCAT CGGCAGCGAA CCGCCGCACA TACTCTGA
 
Protein sequence
MSEAKRRAAE KAIEYVENDM IIGVGTGSTV AYFIDALGRT PKRIKGAVSS SEQSTAHLKQ 
HGIEVLELNH TGTLPLYVDG ADECDPYKRL IKGGGASLTR EKIIAEASKQ FICIIDPNKQ 
VATLGKFPLP IEVIPMARSL VARQIMARTD GQPVWREGVI TDNGNVILDV HHLCITDPVK 
LEQELNQIPG VVCVGLFARR CADLVIIGSE PPHIL