| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0942 |
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| Symbol | |
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| ID | 6120801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1021492 |
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| End bp | 1022298 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641648986 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001775550 |
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| Protein GI | 170730117 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATT CTAAAGTTGT TGTCATCACT GGTGTTTCAT CAGGCATCGG ACGTGCGACC
GCATTGATAC TTGCCAAACA AGGTTGCCAA GTATTCGGAA CCGTGCGCAA TGCGGAAAAA
GCGCAGGCAA TACCGGGGGT TGTGCTCGTC GAGATGGATA TTCGTGACGA CGTATCAGTT
GAACGAGGAA TCCAAAACAT CATCGCTCAA GCCAAGCGTA TCGACGTGCT GGTCAATAAC
GCGGGCGTGA CCTTACTAGG CGCAACGGAA GAAACATCGG TTACAGAAGC TAAGACTTTA
TTTGACACCA ATCTTTTTGG CATGTTGCGT ACGATTAAAG CTGTGCTGCC GCACATGCGC
GGGCAGCGAT CTGGTCGGAT CGTCAACATC AGCTCAGTGT TGGGCTTTCT GCCCGCACCC
TACATGGCGC TCTATTCAGC TTCTAAGCAC GCCGTTGAAG GCCTATCAGA AACGTTGGAT
CACGAGGTAC GTCAATTCGG GATTCGCGTG CCGCTTGTTG AGCCGTCTTT TACCAAAACC
AATGTGGATC TGAATGCACC GCAGACAGCT TCCAAGATTC CTGATTACAG CAGGGAGTTT
GACATCGTTT CCAAAGCCAT TCAGAAGAAT GTCCAGAAAG CGCCCGATCC TGAAGGCGTA
GCCAGCACGA TACTCAATGC AGCCTTGGGG AGATGGAAGA TGCGCCATAC CCCCAAAGGC
CAGGCGTCAT GTCTGGCTAA ATTGCGCCGT TTCATGCCTG CTGGACCGGT CGAGAAAGGT
CTGAGAAAAA CATTTGGGTT AGGTTAA
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| Protein sequence | MSNSKVVVIT GVSSGIGRAT ALILAKQGCQ VFGTVRNAEK AQAIPGVVLV EMDIRDDVSV
ERGIQNIIAQ AKRIDVLVNN AGVTLLGATE ETSVTEAKTL FDTNLFGMLR TIKAVLPHMR
GQRSGRIVNI SSVLGFLPAP YMALYSASKH AVEGLSETLD HEVRQFGIRV PLVEPSFTKT
NVDLNAPQTA SKIPDYSREF DIVSKAIQKN VQKAPDPEGV ASTILNAALG RWKMRHTPKG
QASCLAKLRR FMPAGPVEKG LRKTFGLG
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