Gene Xfasm12_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0886 
Symbol 
ID6120745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp957522 
End bp958958 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content53% 
IMG OID641648936 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001775501 
Protein GI170730068 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAC ATTACGACGT CGTTGTTATC GGAGCCGGTC CAGCTGGCTA TCACGCTGCA 
ATCCGCGCCG CCCAACTGGG TCTGAAGGTC GCTTGCGTCG ATGCAGCACT CGGCAAGGAC
GGTAAGCCAG CGCTTGGAGG CACGTGTCTA CGCGTGGGAT GCATCCCTTC CAAAGCACTG
CTGGACTCCT CCCGCCAGTA CTGGAACATG GGACATCTAT TCAACGAACA TGGCATCAGT
TTCAAAGATG CCAAGATGGA TGTTGCCACG ATGATCGCCC GCAAAGACAA AATCGTGAAA
CAGTTCACGG GTGGCATTGC GATGCTCTTC AAAGCAAACA AAATCACTCC CTACTATGGA
TTTGCCCAAT TGCAACCTGG CAACGTGGTC AAAGTGAAAC AACACGAGGG TAAGAACATC
GAACTGAAAG GCGCCAACGT GATCCTGGCA TCCGGCTCGG ATTCCGTTGA ACTGCCATTT
GCAACGTTCG ACGGTGAAAC GATTGTCGAC AATATCGGTG CCCTGGACTT TACAAAAGTC
CCAAAACGCT TGGCAGTGAT CGGTGCCGGA GTCATCGGTC TGGAATTAGG CAGCGTATGG
AAACGCCTAG GTGCGGAAGT CACTATTCTT GAAGCAATGC CAAACTTTCT AGCTGCAGTT
GACGCCGATG TCGCCAAAAC CGCCGCCAAG GAATTCAAGC AACAGGGGCT GGACATTAAG
CTCGGCGCTA AGGTCTCCCG AACCGAAATC TCAAGTAAAA ACAACAAAAA AGAAGTCATC
GTTACCTACA CTGACGCCTC CGGTAAGCAG ACACTCACTG TCGACAAACT ATTAGTGGCT
GTCGGGCGCA AGGCCGCAAC CAAGGGATTG CTTGCAGATG GCACGGGGGT ACAGCTCAAC
GAACGTGGCC AGATCGTGGT GGACGAACAC TGTCATACCG GTGTCGACGG TGTCTGGGCC
ATTGGCGACT GTGTACGCGG CCCGATGTTG GCTCACAAAG GCTTCGAAGA GGGGATCGCA
GTAGCTGAAT TGATCGCGGG CATGCCAGGC CATGTGAACT TTGAAACCAT CCCATGGGTC
ATCTACACAG AGCCGGAAAT CGCCTGGGTT GGTAAGACTG AGCAAGAACT CAAAGCAGAC
AGCATTCCTT ACAAAGCTGG ATCCTTCCCG TTCGCCGCAG TCGGCCGCGC CGTTGCGATG
GCCGAGCCAT CTGGTTTTGT GAAAGTCCTA GCGCATGCAG AAACTGACCG CGTGTTAGGT
TTACATCTGA TCGGTGTGAA CGTCTCCGAA TTGGTACATG AAGGGGTATT GGCTATGGAA
TTTAGTGGCT CAGCTGACGA TCTCGCCCGG ATCTGCCACG CCCACCCAAC CTTATCGGAA
GCAATCCACG ACGCAGCTAT GGCGGTCAGC AAGCGCGCAA TCCATAAAGC AAACTGA
 
Protein sequence
MSEHYDVVVI GAGPAGYHAA IRAAQLGLKV ACVDAALGKD GKPALGGTCL RVGCIPSKAL 
LDSSRQYWNM GHLFNEHGIS FKDAKMDVAT MIARKDKIVK QFTGGIAMLF KANKITPYYG
FAQLQPGNVV KVKQHEGKNI ELKGANVILA SGSDSVELPF ATFDGETIVD NIGALDFTKV
PKRLAVIGAG VIGLELGSVW KRLGAEVTIL EAMPNFLAAV DADVAKTAAK EFKQQGLDIK
LGAKVSRTEI SSKNNKKEVI VTYTDASGKQ TLTVDKLLVA VGRKAATKGL LADGTGVQLN
ERGQIVVDEH CHTGVDGVWA IGDCVRGPML AHKGFEEGIA VAELIAGMPG HVNFETIPWV
IYTEPEIAWV GKTEQELKAD SIPYKAGSFP FAAVGRAVAM AEPSGFVKVL AHAETDRVLG
LHLIGVNVSE LVHEGVLAME FSGSADDLAR ICHAHPTLSE AIHDAAMAVS KRAIHKAN