Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0886 |
Symbol | |
ID | 6120745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 957522 |
End bp | 958958 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641648936 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001775501 |
Protein GI | 170730068 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAC ATTACGACGT CGTTGTTATC GGAGCCGGTC CAGCTGGCTA TCACGCTGCA ATCCGCGCCG CCCAACTGGG TCTGAAGGTC GCTTGCGTCG ATGCAGCACT CGGCAAGGAC GGTAAGCCAG CGCTTGGAGG CACGTGTCTA CGCGTGGGAT GCATCCCTTC CAAAGCACTG CTGGACTCCT CCCGCCAGTA CTGGAACATG GGACATCTAT TCAACGAACA TGGCATCAGT TTCAAAGATG CCAAGATGGA TGTTGCCACG ATGATCGCCC GCAAAGACAA AATCGTGAAA CAGTTCACGG GTGGCATTGC GATGCTCTTC AAAGCAAACA AAATCACTCC CTACTATGGA TTTGCCCAAT TGCAACCTGG CAACGTGGTC AAAGTGAAAC AACACGAGGG TAAGAACATC GAACTGAAAG GCGCCAACGT GATCCTGGCA TCCGGCTCGG ATTCCGTTGA ACTGCCATTT GCAACGTTCG ACGGTGAAAC GATTGTCGAC AATATCGGTG CCCTGGACTT TACAAAAGTC CCAAAACGCT TGGCAGTGAT CGGTGCCGGA GTCATCGGTC TGGAATTAGG CAGCGTATGG AAACGCCTAG GTGCGGAAGT CACTATTCTT GAAGCAATGC CAAACTTTCT AGCTGCAGTT GACGCCGATG TCGCCAAAAC CGCCGCCAAG GAATTCAAGC AACAGGGGCT GGACATTAAG CTCGGCGCTA AGGTCTCCCG AACCGAAATC TCAAGTAAAA ACAACAAAAA AGAAGTCATC GTTACCTACA CTGACGCCTC CGGTAAGCAG ACACTCACTG TCGACAAACT ATTAGTGGCT GTCGGGCGCA AGGCCGCAAC CAAGGGATTG CTTGCAGATG GCACGGGGGT ACAGCTCAAC GAACGTGGCC AGATCGTGGT GGACGAACAC TGTCATACCG GTGTCGACGG TGTCTGGGCC ATTGGCGACT GTGTACGCGG CCCGATGTTG GCTCACAAAG GCTTCGAAGA GGGGATCGCA GTAGCTGAAT TGATCGCGGG CATGCCAGGC CATGTGAACT TTGAAACCAT CCCATGGGTC ATCTACACAG AGCCGGAAAT CGCCTGGGTT GGTAAGACTG AGCAAGAACT CAAAGCAGAC AGCATTCCTT ACAAAGCTGG ATCCTTCCCG TTCGCCGCAG TCGGCCGCGC CGTTGCGATG GCCGAGCCAT CTGGTTTTGT GAAAGTCCTA GCGCATGCAG AAACTGACCG CGTGTTAGGT TTACATCTGA TCGGTGTGAA CGTCTCCGAA TTGGTACATG AAGGGGTATT GGCTATGGAA TTTAGTGGCT CAGCTGACGA TCTCGCCCGG ATCTGCCACG CCCACCCAAC CTTATCGGAA GCAATCCACG ACGCAGCTAT GGCGGTCAGC AAGCGCGCAA TCCATAAAGC AAACTGA
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Protein sequence | MSEHYDVVVI GAGPAGYHAA IRAAQLGLKV ACVDAALGKD GKPALGGTCL RVGCIPSKAL LDSSRQYWNM GHLFNEHGIS FKDAKMDVAT MIARKDKIVK QFTGGIAMLF KANKITPYYG FAQLQPGNVV KVKQHEGKNI ELKGANVILA SGSDSVELPF ATFDGETIVD NIGALDFTKV PKRLAVIGAG VIGLELGSVW KRLGAEVTIL EAMPNFLAAV DADVAKTAAK EFKQQGLDIK LGAKVSRTEI SSKNNKKEVI VTYTDASGKQ TLTVDKLLVA VGRKAATKGL LADGTGVQLN ERGQIVVDEH CHTGVDGVWA IGDCVRGPML AHKGFEEGIA VAELIAGMPG HVNFETIPWV IYTEPEIAWV GKTEQELKAD SIPYKAGSFP FAAVGRAVAM AEPSGFVKVL AHAETDRVLG LHLIGVNVSE LVHEGVLAME FSGSADDLAR ICHAHPTLSE AIHDAAMAVS KRAIHKAN
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