Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0865 |
Symbol | |
ID | 6121427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 933887 |
End bp | 934654 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641648917 |
Product | putative general secretion pathway protein N |
Protein accession | YP_001775482 |
Protein GI | 170730049 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000929632 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATTG ATGCCTTTTC GGTATGGACC TGGTTGTTTG CCACGGTTGC AGGCTGGGCT GCCTTGGTTT GTATGTTGGC GTTGGCAGGC ATGGGAAGAA GCGTGCAACT GCTTCGTGAT GATTCGCAAT TAATCCGGCA GAAGTTGCCA TCATTGCCTG CTTCAGCAGC CGAGCATTTT GGCCCATTCA CCCGTTATGG TGAGATTGCT GCGCGTCCAG TGTTTTCCGA GGATCGCAAA CCACATCCGT TCCTGTTGGT GTCAGGCGAA AATACGAGTG TTGAAAGCGA TGTACGTTTG ACCGGGGTGC TAATCACACC TAAATTTAAA ATGGCAACCT TGACCAACGA GCAAAACCAG TCGCTACGGA TCCGTTTGGG TGGAGATGCA GTCAATGGGT GGCGCCTGAT TAGTTTACAG CCACGCAGCG CTACGATTGA AGGTGCTGGT GGTACTCGCA CTCTGGAATT ACAGCCCTTT AATGGTCAGG CCAATAAAAA TGCGAACAAT CCTCCTGAAA ATAAGGTGCC AACGATGGTT GAGCATCATG TTGCCTCACC CTCATCGGAG GCTGCCTCGG CTGCTTTAGT AAAGCCTAGT ACATCTTCTG TTTCGCAAAG TGACAGGGTT CCTGGGGGAC AGCAACCGGC TGCGGTGACA GGACCGCAAG CTCCTGAAAA GCCCATTGAT GCACAGATAC GTGCTATCCG TGAGCGCATT GAAGCCCGTC GGCGTCAACT TCAGCAACAA CAAGAGCAAC AAAAGTAA
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Protein sequence | MRIDAFSVWT WLFATVAGWA ALVCMLALAG MGRSVQLLRD DSQLIRQKLP SLPASAAEHF GPFTRYGEIA ARPVFSEDRK PHPFLLVSGE NTSVESDVRL TGVLITPKFK MATLTNEQNQ SLRIRLGGDA VNGWRLISLQ PRSATIEGAG GTRTLELQPF NGQANKNANN PPENKVPTMV EHHVASPSSE AASAALVKPS TSSVSQSDRV PGGQQPAAVT GPQAPEKPID AQIRAIRERI EARRRQLQQQ QEQQK
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