Gene Xfasm12_0839 details

Gene Information

• Locus tag: Xfasm12_0839
• ID: 6121401
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: -
• Start bp: 905159
• End bp: 906997
• Gene Length: 1839 bp
• Protein Length: 612 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641648892
• Product: NADPH-sulfite reductase flavoprotein subunit
• Protein accession: YP_001775457
• Protein GI: 170730024
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0369] Sulfite reductase, alpha subunit (flavoprotein)
• TIGRFAM ID: [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.305761
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGCCC CCACCTATTC CCTTACCGCA AGCCCCCTCC CCGAGCACCG TCGCTCCCTG 
CTCATGGATC TCGTCAAGGA CCTGGACACA CCGTCCCTAT GGTGGCTATC CGGCTATGTC 
GCTGGACTGG CACAAAGCCA ACTCACATCC ACATTAACAG CCGTACCAGA AGAAGATTCA 
GGGACCCAAG CCAAACAACG CCTCACCGTG CTCTACGGCA GCCAGACCGG CAACGCACAG 
CGCATTGCTG AACAACTTGC CGCCGAAGCC GAAGCCGCAG GACTGGCAAG GCGCCTAATT 
CGAGCCGATA ACTACACCCC TCGTGAACTG GCTGCAGAAC GGCTGCTGTA CATCGTCATC 
AGTACTCAGG GAGAAGGTGA TCCACCAGAT GACTCCATCG GCTTTGTGGA ATTTCTGAAT 
GAGCGACGCG CACCCAAATT ACCCGAACTG AAATACGCCG TCCTTGGCCT AGGAGACTCC 
AGTTACGCTG ACTTCTGCGG CATCGCCCGC CGTATGGACG CACGATTGCA AGCACTCGGT 
GCACAACGGC TGCAACCATT AGGCGAAGCC GATGTGGATA TCAATACAGT CGCCACACCA 
TGGCTGAAAC AAGCGCTGCA CCATGCCCGC GAGCAACTTA AAAACGCCAC CGCCCCACTG 
ACCAATGTCA CACCGTTACG CGGCAATTCA GCTCTCCGTG GATCCAATCA GACGTTCCAA 
GCTGAACTGT TCAAAAACCA ACTGATCAGC GGACGCGACT TTAAAGGTCC AGCGTTCCGA 
ACACATGGCC AGGCCTCGAA ACGGGTCCAC CACCTAGAGC TGTCGCTGGA AGGCAGCGGA 
TTACACTACG AACCAGGCGA CGCACTGGGC GTACATCACC GTAATCCCAA TACGCTTGTA 
GATGCTGTCC TTACGACACT TAAACTTTCA GCCCACACCG AAGTAACACA AGATAAGGAA 
ACCTTGCCGC TGTCCGAGTG GCTCGCCACC CGACGCGAAG TGACCAGATT GTCGCGGCCA 
TTCTTGGCTG CGCATGCCGA ACGATCCGGT GCTGAGGAAC TGCGCGCGCT ACTCACCCCA 
ACCCAGACTG CCGGACTAGC GACGCTACTC AACGATCATC AACTGATCGA CGTATTGCGA 
CGCTGGCCGG CGGATTGGGA CCATACCGCA CTGGTTGCAG CATTACGCCC CCTCACACCA 
CGGCTGTATT CGATTGCTTC CAGCCGCAAG CGTGTCGGCG AGGAAGTCCA CATCACGATT 
GATGAACTGC ACTATCAAGC ACACGGCCAC GAACACATTG GTGCAGCAAG CAGCTTCCTG 
GCTGGTTTGA CAGAAGCAGA TACCCTCCCT GTCTACATCC AACCCAATGA GCGCTTCCGT 
TTACCGGCGG ATGCAACGCG CGACATCATC ATGATTGGCT CTGGAACTGG AGTAGCACCA 
TTCCGCGCTT TCGTCCAAGA ACGCGCAGAA AGTGGCGCAA CCGGGCGTAA CTGGTTGTTC 
TTCGGCGCAC AACACTTCAA TTGCGACTTT CTGTATCAGA CCGAATGGCA ACAAGCCTTA 
CAACGCGGTG AACTGCACGC ATTGGATCTT GCATTCTCCC GTGACAACGC TGAAAAAATC 
TACGTACAGC ACCGCTTATT AGCACAGGGG CAAGAGGTGT ACACCTGGCT CCAAAATGGC 
GCATATCTGT ATGTCTGCGG CGCAATCAGC ATGAGTAAAG ACGTCCATAC AACACTGCTA 
CAAATCCTCG TCACACATGG CAACCTCACC AAAGAAGCCG CCGCAGAGAC GTTGATTGGA 
ATGCAACGCG AAGGACACTA TGCACGTGAT GTGTATTAA 

 

Protein sequence

MTAPTYSLTA SPLPEHRRSL LMDLVKDLDT PSLWWLSGYV AGLAQSQLTS TLTAVPEEDS 
GTQAKQRLTV LYGSQTGNAQ RIAEQLAAEA EAAGLARRLI RADNYTPREL AAERLLYIVI 
STQGEGDPPD DSIGFVEFLN ERRAPKLPEL KYAVLGLGDS SYADFCGIAR RMDARLQALG 
AQRLQPLGEA DVDINTVATP WLKQALHHAR EQLKNATAPL TNVTPLRGNS ALRGSNQTFQ 
AELFKNQLIS GRDFKGPAFR THGQASKRVH HLELSLEGSG LHYEPGDALG VHHRNPNTLV 
DAVLTTLKLS AHTEVTQDKE TLPLSEWLAT RREVTRLSRP FLAAHAERSG AEELRALLTP 
TQTAGLATLL NDHQLIDVLR RWPADWDHTA LVAALRPLTP RLYSIASSRK RVGEEVHITI 
DELHYQAHGH EHIGAASSFL AGLTEADTLP VYIQPNERFR LPADATRDII MIGSGTGVAP 
FRAFVQERAE SGATGRNWLF FGAQHFNCDF LYQTEWQQAL QRGELHALDL AFSRDNAEKI 
YVQHRLLAQG QEVYTWLQNG AYLYVCGAIS MSKDVHTTLL QILVTHGNLT KEAAAETLIG 
MQREGHYARD VY