| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0829 |
|---|
| Symbol | ubiE |
|---|
| ID | 6121391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 890261 |
|---|
| End bp | 891022 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641648882 |
|---|
| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
|---|
| Protein accession | YP_001775447 |
|---|
| Protein GI | 170730014 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.746498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAT CTTCCGAGAA AACCAGCACG ACCCATTTCG GCTTCCGCCA GGTTGCGGCC
AAGGACAAGA AGACGCTGGT TGCCGAGGTG TTTACTTCGG TCTCACGTCG CTATGACTTG
ATGAACGATC TGATGAGCCT GGGTATTCAT CGGGCCTGGA AGCGTTACTT CGTCGCTACT
GCTCAGGTGA AGTCAGGTGA CCGTGTGCTT GACCTTGCAG GTGGCACCGG CGATATCGCA
ATGCTATTGA AGAATCGGGT TGGTGCAGAG GGGAGTATCG TACTTGGCGA TATCAATGCC
AGCATGCTGT CCGTTGGGCG GGATAGGCTG ATTGATCGTG GCGTGGTGGC TCGTCTGGAA
TATGTGCAAT GCAACGCTGA AGCGCTGCCG TTTCAGGATA AGTGCTTCGA CTTGGTGACG
ATGTCTTTTG GTTTGCGCAA TGTGACCGAC AAAGATACAG CGCTACGCGA GATGTTCCGT
GTGCTGAAGG TGGGTGGCCA GGCAAGGGTA CTGGAATTCT CCACGGTAAC TGCCGAGTGG
TTTAAGCCAA TTTATGATTT CCACTCCTTC CAGGTGTTAC CGCGTCTGGG GTGGTTGTTT
GCCAGGGATG CTGCTAGCTA TCGTTACCTT GCTGAGAGCA TTCGGAAGCA TCCACCGCAG
GAAGAGTTGC AGGCGATGAT GGGGGCGGCT GGGTTTGAGC GTTGTGGCTA TAGGAATTTG
ACCGGTGGCA TTGTTGCGAT TCATTCCGGA TATAAATATT GA
|
|---|
| Protein sequence | MSESSEKTST THFGFRQVAA KDKKTLVAEV FTSVSRRYDL MNDLMSLGIH RAWKRYFVAT
AQVKSGDRVL DLAGGTGDIA MLLKNRVGAE GSIVLGDINA SMLSVGRDRL IDRGVVARLE
YVQCNAEALP FQDKCFDLVT MSFGLRNVTD KDTALREMFR VLKVGGQARV LEFSTVTAEW
FKPIYDFHSF QVLPRLGWLF ARDAASYRYL AESIRKHPPQ EELQAMMGAA GFERCGYRNL
TGGIVAIHSG YKY
|
|---|
| |