Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0817 |
Symbol | |
ID | 6121379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 876601 |
End bp | 877443 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641648870 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_001775435 |
Protein GI | 170730002 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTATGC TGAAGATCGA CACCCTCCAT GCCTCCGTCG CCGGCAAGGA AATCCTCAAA GGCCTTTCCC TGGACATCGC ACCTGGCCAA GTGCATGCCA TCATGGGACC CAACGGTGCC GGAAAATCCA CCCTGGGTCA CATCCTTGCT GGCCGCGACG GCTACGACGT CACCGCAGGT CAAGTGACCT TCGACAATCG CCCCCTGCTC ACACTCCAAC CAGAAGAACG CGCCGCCGCT GGATTATTTC TAGCATTTCA ATACCCCGTG GAAATTCCTG GAGTGAACAA CACCTACTTC CTACGCTCAG CACTCAACGC ACAACGCAAA GCACGCGGTG AAGAAGAACT TGACTCAATA CAATTTCTCA AACGTGTCCG AGAAAAACTC GCGGTACTGC ATCTGAAAGA CGAACTGCTG CACCGCGGCG TCAACGAAGG ATTTTCCGGC GGAGAGAAAA AGCGCAATGA AATCTTCCAA CTCGCCGTCC TCGAACCCAA ACTTGCCATC CTAGACGAAA CCGACTCAGG CCTAGACATC GACGCACTGA AAACCGTCGC CGATGGCGTC AACGCCCTGC GCTCACCGGA ACGCTCATTC CTGGTCATCA CCCACTACCA ACGCCTGCTC GACTACATCA AACCCGACGT TGTACACGTA CTTGCCGAAG GTCGCATCGT AGAAACCGGC GGCCCTGAAC TGGCACTGGA ATTAGAACAA CATGGCTACA CCTGGTTGAA AAATCGTGTC ATCCCCACCA GCGAAACAAT GCCTCCCTCC CCCCATGATC CACACACCGA CACACCCAGA CTGAAGGCAC CAACACCGCG GGAAAATGTC TAA
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Protein sequence | MTMLKIDTLH ASVAGKEILK GLSLDIAPGQ VHAIMGPNGA GKSTLGHILA GRDGYDVTAG QVTFDNRPLL TLQPEERAAA GLFLAFQYPV EIPGVNNTYF LRSALNAQRK ARGEEELDSI QFLKRVREKL AVLHLKDELL HRGVNEGFSG GEKKRNEIFQ LAVLEPKLAI LDETDSGLDI DALKTVADGV NALRSPERSF LVITHYQRLL DYIKPDVVHV LAEGRIVETG GPELALELEQ HGYTWLKNRV IPTSETMPPS PHDPHTDTPR LKAPTPRENV
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