Gene Xfasm12_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0817 
Symbol 
ID6121379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp876601 
End bp877443 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content55% 
IMG OID641648870 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001775435 
Protein GI170730002 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATGC TGAAGATCGA CACCCTCCAT GCCTCCGTCG CCGGCAAGGA AATCCTCAAA 
GGCCTTTCCC TGGACATCGC ACCTGGCCAA GTGCATGCCA TCATGGGACC CAACGGTGCC
GGAAAATCCA CCCTGGGTCA CATCCTTGCT GGCCGCGACG GCTACGACGT CACCGCAGGT
CAAGTGACCT TCGACAATCG CCCCCTGCTC ACACTCCAAC CAGAAGAACG CGCCGCCGCT
GGATTATTTC TAGCATTTCA ATACCCCGTG GAAATTCCTG GAGTGAACAA CACCTACTTC
CTACGCTCAG CACTCAACGC ACAACGCAAA GCACGCGGTG AAGAAGAACT TGACTCAATA
CAATTTCTCA AACGTGTCCG AGAAAAACTC GCGGTACTGC ATCTGAAAGA CGAACTGCTG
CACCGCGGCG TCAACGAAGG ATTTTCCGGC GGAGAGAAAA AGCGCAATGA AATCTTCCAA
CTCGCCGTCC TCGAACCCAA ACTTGCCATC CTAGACGAAA CCGACTCAGG CCTAGACATC
GACGCACTGA AAACCGTCGC CGATGGCGTC AACGCCCTGC GCTCACCGGA ACGCTCATTC
CTGGTCATCA CCCACTACCA ACGCCTGCTC GACTACATCA AACCCGACGT TGTACACGTA
CTTGCCGAAG GTCGCATCGT AGAAACCGGC GGCCCTGAAC TGGCACTGGA ATTAGAACAA
CATGGCTACA CCTGGTTGAA AAATCGTGTC ATCCCCACCA GCGAAACAAT GCCTCCCTCC
CCCCATGATC CACACACCGA CACACCCAGA CTGAAGGCAC CAACACCGCG GGAAAATGTC
TAA
 
Protein sequence
MTMLKIDTLH ASVAGKEILK GLSLDIAPGQ VHAIMGPNGA GKSTLGHILA GRDGYDVTAG 
QVTFDNRPLL TLQPEERAAA GLFLAFQYPV EIPGVNNTYF LRSALNAQRK ARGEEELDSI
QFLKRVREKL AVLHLKDELL HRGVNEGFSG GEKKRNEIFQ LAVLEPKLAI LDETDSGLDI
DALKTVADGV NALRSPERSF LVITHYQRLL DYIKPDVVHV LAEGRIVETG GPELALELEQ
HGYTWLKNRV IPTSETMPPS PHDPHTDTPR LKAPTPRENV