Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0815 |
Symbol | |
ID | 6121377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 874095 |
End bp | 875345 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641648868 |
Product | selenocysteine lyase |
Protein accession | YP_001775433 |
Protein GI | 170730000 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.643683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGTA TAAACACCTC CGCAGCCCCC CCCACATCCC CCGATTGGGA AAGCCTGCGT GCCGACTTCC CCCTACTGCA ACGCCACGTA CACGGAAAAC CGCTGATCTA TTTCGACAAC GCAAATACCG CACAAAAACC CCAGGCAGTG ATCACTGCCA CCGACACCTT CTACCGCCGC CACAACGCCA ACATCAGCCG TGCCGTACAC ACACTAGGCA CCGAAGCCAC CGAAGCCTAC GAAGCCACAC GAGCAGCACT GGCAACCCTA CTTAACGTCC CCATGCACGA ACTGGTGCTA TGCAGCGGCA CGACCTTCGC CATCAACCTC ATTGCCTACT CCTGGGCACT GCCACGACTG CGTACCGGCG ACGTGATCCT AGTCTCACGG ATGGAACACC ACGCCAACAT CGTCCCCTGG CAATTGATCG CTGAACGTAC TGGTGCACGT ATCCAAGTCG CCGACATCCT GCCTAACGGC ACCTTGGATC TAGATGCCCT GCATACCCTG ATGACACCCC AAGTCAAACT GCTGGCCATC ACGCATGTGT CCAACGTCCT GGGCACCGTT AACCCGATAC ACGACATCTG CCGCCAAGCA CGGCAACGCG GCATTACGAC CGTCGTCGAC GGCTCCCAAG CGGCACCACA CCGCCACATT GATATTCCGG CCATCGGCTG CGACTTCTAT GCCATCACCG GACACAAACT CTACGGCCCC ACAGGAACCG GAGCATTATG GGCACGCCGC GAACACCTCC ACATCATGCC ACCATTTCTA GGTGGCGGAG AAATGATTAA AGAAGTGAGT TTTGACGGCA CCCTCTTCAA CACCCCACCA CATAAATTTG AAGCAGGCAC CCCCAACATT GCCGGCTTCA TCGGCCTCAG CGCCGCCGTA GATTACGTGC GTCGTATCGG AATCGACCAG ATCGAAACAC GCGAAACAGA ACTACTGGCA CATCTCACCG AAGAACTACA GAAAATCGAC GGCATGCGAC TCTTCGGCAC CGCACCCAAC AAAGCCGCCG TGGTTTCCTT CATGATCGAA GGCACACACG CCCACGACCT GGCCACACTG CTCGACCTGG AAGGCGTTGC CGTACGCTCT GGTCAACACT GCGCACACCC CCTCCTGCAA TACTACGGAG TGACCGCCAC CTGCCGCGCC TCACTGGCGT TCTACAACAC TCACGAAGAG ATAGAACGCT TCATCACGGC CCTGCTCAAG GTACGCAAAC TACTAGGCTG A
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Protein sequence | MDRINTSAAP PTSPDWESLR ADFPLLQRHV HGKPLIYFDN ANTAQKPQAV ITATDTFYRR HNANISRAVH TLGTEATEAY EATRAALATL LNVPMHELVL CSGTTFAINL IAYSWALPRL RTGDVILVSR MEHHANIVPW QLIAERTGAR IQVADILPNG TLDLDALHTL MTPQVKLLAI THVSNVLGTV NPIHDICRQA RQRGITTVVD GSQAAPHRHI DIPAIGCDFY AITGHKLYGP TGTGALWARR EHLHIMPPFL GGGEMIKEVS FDGTLFNTPP HKFEAGTPNI AGFIGLSAAV DYVRRIGIDQ IETRETELLA HLTEELQKID GMRLFGTAPN KAAVVSFMIE GTHAHDLATL LDLEGVAVRS GQHCAHPLLQ YYGVTATCRA SLAFYNTHEE IERFITALLK VRKLLG
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