| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0811 |
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| Symbol | |
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| ID | 6121373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 871151 |
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| End bp | 872005 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641648864 |
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| Product | Shf protein |
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| Protein accession | YP_001775429 |
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| Protein GI | 170729996 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTG CAACAGCCGT CCCTGTCCTC ATGCACCATC ACGTTTCACC ATCAACGGGC
ATGATCACCG TCTCCCCGGA ACACTTTGAA AGCCAGATTG CATGGCTGGC GAATGACGGC
TGGACCTCAC TCACCCTGGA GCAATACGCC GGCTTTCTCG CCGGTCAACC CGTGCCGCAC
AAATCGATCG TGATTACCTT CGACGACGGC TATCTGGATA ACTGGGTCTA CGCACATCCG
ATCTTGCAGA AATACCACAT GCATGCCGTC GTTTTCATTG TCACCAGCTG GATTGGCGAT
GGCCCAGCGC GTCCCCATGC TGGACAATCC GGCGCGATAT TGCCCACAAC GCCAAACCAC
CATGCGTGCG AAACAGCCAT CCTGCATGAG GGGCGCACCG ACGAAGTGAT GCTACGTTGG
AGCGAAGTGC AAGCAATGAT CGCCGCAGGC ACCTTTGAGG CACATTGCCA TACACACACC
CATACACGCT GGCTAACACT ACAACTCAGC CGCGCCCAAC GACGCGAAGG TCTCGACCGG
GACCTCATCA CCGCACGTAC AGTACTGCAA CAACGCCTAG GCAACGTCTC CAACACACTG
TGCTGGCCAT ACGGCGACTT CGATGCAGAC CATATCGAAA TCGCACGCGC CCATGGCTTT
CGCTATTTCC ACACCACACA TCCCTTTGGA CGCAACGTCA TTGGCGGCAA CCCAGAACAC
ATCTACCGCT TCGCGCTCCG TAACCGCCCG GGGCACTGGC TGCGCAAACG CATCGCGCTC
AGCTACCACC CACTCATTGC ACCATTATTC AACCGCTTCA AAAGCCATAA AAAAGGCATG
CAGCCGGGTC CATGA
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| Protein sequence | MSRATAVPVL MHHHVSPSTG MITVSPEHFE SQIAWLANDG WTSLTLEQYA GFLAGQPVPH
KSIVITFDDG YLDNWVYAHP ILQKYHMHAV VFIVTSWIGD GPARPHAGQS GAILPTTPNH
HACETAILHE GRTDEVMLRW SEVQAMIAAG TFEAHCHTHT HTRWLTLQLS RAQRREGLDR
DLITARTVLQ QRLGNVSNTL CWPYGDFDAD HIEIARAHGF RYFHTTHPFG RNVIGGNPEH
IYRFALRNRP GHWLRKRIAL SYHPLIAPLF NRFKSHKKGM QPGP
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