| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0801 |
|---|
| Symbol | |
|---|
| ID | 6121363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 860272 |
|---|
| End bp | 861456 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641648855 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001775420 |
|---|
| Protein GI | 170729987 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1565] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGCTG ATGCCCCTGC CCCCCTGCCT GAAGCGCTTG CCCACAGCGA GCAACTGGCA
GCCTATATAC GCCAACAGAT GATTCAAAGC GGCGGAGCGA TTCCATTCTC TCGTTTTATG
GAGCTGGCTT TGTATGCCCC TGGTCTGGGT TATTACAGTG CCGGCGCGAG TAAATTTGGT
GAGGCTGGCG ATTTTATCAC TGCTCCTGAA TTGGGATCGC TATTCGCTAC AACGGTAGCG
AATGCCTTGG CGCCTGTGTT GCAGCAACTC GGTGCGTTGG CGTGTGTGCT CGAATTGGGA
GGTGGCAGCG GCGCGTTCGC TGAAATGCTG CTCAAGCGCC TGATGGAACT GCATAGGCTG
CCGCAGCGCT ATGCGATCCT GGAACCCAGT GCTGAGTTGC GTCAACGTCA GCAATTGCAC
TTGAAACGCA CATTGCCTCC ATCCCTTTTC GCCTTGGTTG AATGGGTGGA TGCTCCCTTC
TCGGAGCAGT GGGATGGCGT GGTGTTTGCC AATGAGGTGA TTGATGCCTT ACCTGCCTCG
CGTTTCACAA TACGCGATGG CCAAGTGTAC GAGGCAACAG TGCTATTGGA TGCACAGCAG
CGCTTTGTAT CTGGCCAACA GCCAGCCGAT GCACTGTTGC ATCAGGCAGT GCGTAATATT
GAGCGCGACT TGTCAGTGCG CTTTGCCGAC GGTTATTGCT CAGAGGTGTT ACCGCAACTG
CCGTATTGGG TGCAGGCAGT CGTTGGTGGC CTCAAGCGCG GTGTATTGCT TTTTGTCGAT
TATGGTTATC CACGTGCCGA GTATTACCGC CCTGAGCGTG ACACTGGCAC CCTCAGGGCG
TTTTACCGGC ATCGCGTGCA TGATGATTGG TACCGCTGGC CAGGACTACA GGATGTGACT
GCTTCGGTGG ATTTTACCGC CTTGGCCGAA GCCGGCACCG CTGCTGGTTT TGATATGGCT
GGTTATTGTA CCCAGGCGAA CTTTTTACTC AGTCATGGAT TGGATCGGCT GCTTGCTCAC
GCTGAAGAGG GTGTTGATGA GGTGGCTAAG CTGCTGTTGC GCAACCAAGT GAAGCGCCTT
ACCTTGCCAA CCGAGATGGG GGAGCGTTTT CAGGTGATGG GGTTTGCTCG TGAGGTAGAG
TTTGATCATG CGTTCTTGAA GGGAGACCTG ATATGGCGGC TATGA
|
|---|
| Protein sequence | MCADAPAPLP EALAHSEQLA AYIRQQMIQS GGAIPFSRFM ELALYAPGLG YYSAGASKFG
EAGDFITAPE LGSLFATTVA NALAPVLQQL GALACVLELG GGSGAFAEML LKRLMELHRL
PQRYAILEPS AELRQRQQLH LKRTLPPSLF ALVEWVDAPF SEQWDGVVFA NEVIDALPAS
RFTIRDGQVY EATVLLDAQQ RFVSGQQPAD ALLHQAVRNI ERDLSVRFAD GYCSEVLPQL
PYWVQAVVGG LKRGVLLFVD YGYPRAEYYR PERDTGTLRA FYRHRVHDDW YRWPGLQDVT
ASVDFTALAE AGTAAGFDMA GYCTQANFLL SHGLDRLLAH AEEGVDEVAK LLLRNQVKRL
TLPTEMGERF QVMGFAREVE FDHAFLKGDL IWRL
|
|---|
| |