| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0771 |
|---|
| Symbol | |
|---|
| ID | 6120533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 827669 |
|---|
| End bp | 828457 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641648826 |
|---|
| Product | chitinase |
|---|
| Protein accession | YP_001775391 |
|---|
| Protein GI | 170729958 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1651] Protein-disulfide isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.902637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCGCC TTATCGCCGC CTTGTTGCTG GGTATCGTGA CCCTCACCGC CTGCGCACAA
CCCTCACAAC CCAGCTCCAA CAAAACGAGC ACCACACCAA CCAACGCCAC GCCAGCCAAC
GTGCAACAAC GCGTGACTGC CGCCCTAAAC ACTCTGGACC CAGATTTCAA GCCAGACTAC
ATCGGTGCCG CACCATTCCC GGGTTTCCGT GAAGTTGTGG TCAGCGGCCA AATTCTGTAT
GTCAGCGACA ACGGCCGCTA CCTCATTCAG GCACAACCCT ACGACATTCA AAACAAAAAA
TTTGCTGTCA GCGAAGGGCT GCTTTCCTAC CGCCGCACCC AACTGGCCAC AGTGCCCCAA
TCGCAACGCA TCGTGTTCGC ACCAAAGAAC CCCCAATACA CCATCAGCGT ATTCACCGAC
ATTGAATGCG GCTATTGCCG GAAACTACAT AGCGAAATCG CCGAACTGAA TAAACAAGGC
ATCGCCGTTG AATACCTCGC CTTCCCACGG ATGGGTTTAG GAAGCCAAGA TTACAAAGAC
ATGGTCTCAG TGTGGTGCGC CACTGATCGT AAACAAGCAC TGACCGAAGC AAAAGCCGGC
AAACAAATCC AGAATAAAAA TTGTAATAAC CCTGTTGCCT TGGAATACAG CCTAGGTCAA
CGTATCGGCG TCAACGGCAC CCCAGCAATC TTCGCCCCAG ACGGCACCCA GCTTGGCGGC
TATCTACCAC CAGAAAAACT ACGTGCACTG CTGGACAAAC TCGCCGCCGC CACAGCTAAA
GGGGGCTGA
|
|---|
| Protein sequence | MYRLIAALLL GIVTLTACAQ PSQPSSNKTS TTPTNATPAN VQQRVTAALN TLDPDFKPDY
IGAAPFPGFR EVVVSGQILY VSDNGRYLIQ AQPYDIQNKK FAVSEGLLSY RRTQLATVPQ
SQRIVFAPKN PQYTISVFTD IECGYCRKLH SEIAELNKQG IAVEYLAFPR MGLGSQDYKD
MVSVWCATDR KQALTEAKAG KQIQNKNCNN PVALEYSLGQ RIGVNGTPAI FAPDGTQLGG
YLPPEKLRAL LDKLAAATAK GG
|
|---|
| |