| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0750 |
|---|
| Symbol | |
|---|
| ID | 6120512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 808983 |
|---|
| End bp | 810755 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641648806 |
|---|
| Product | phosphotransferase system enzyme I |
|---|
| Protein accession | YP_001775371 |
|---|
| Protein GI | 170729938 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
|---|
| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.8184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCACT CCGCTCATCG CTCCACCCCC ACACTGCACA CACAGATGAA TGTGCGCCTC
CAGGGCCACG GCGCAGCACG AGGCACTGCA CTGGGGCGCG CCTGGGTCCG TCAGATGAAC
ATCATCGAAA TCCAGGATAA ATACATCACT GACACTAACG CCGAATTACA TAGCTTGTAC
CAAGCCATGA GCGCAGCACG TCAGGAAATA CAAGTACTGC GAGAACGCAT GCATGGCACC
TTGTCCCACG AAGTCGGCGA GTTTCTCGAC CTATACACAC TGTTGATCGA CGACCCTGAG
CTACTACGGA GCCTGAACGA ACTCATCCTC ACTCACAACT ACAGTGCCGA ATACGCCCTG
AAAATACAGC GCGACCACCT CACCACAGAA TTCGAAGCCA TGGAAGACCA CTACCTGAAA
AGTCGCATGG ACGACCTGAA TCACGTGCTA GGACGCATCC ACGCCTTTCT AAAAAAACAC
TCCCCCGAAC CCAAAGATGC TGCAGGTGAA ATCCTCATCT GCAACAACAT CGCCCCATCC
GAATTGGCCC AAGTACAAGC CCAAGGCATT ATTGGAATCG TCATCGCGGC TGGCAATACA
CTCTCGCACA GCGCCATCCT GGCGCATAGC TTGCACCTGC CACTGATCGT TGGTGCAGGA
GACCTGCTGC TACAAAAGAT CACCAACGGC GACATGCTGA TCATCGATGG CAACAGCGGA
GAAATCATTG TCAATCCATC GCCACAGGAC CTGCGTCACT ACCATAGCCG ACTGCGCGAA
CGCGCCAAAG AACAACGTGA GCTGGAACAA CTACGCTCTA AACACAGCCG CACTCGCGAC
AACGTCGACA TTGTCGTACA GGCCAACGCA GAATCACCGG ACGATGTCTC CCAAGCATAC
ACACTGGGAG CGGCCGGTGT GGGCCTGTAC CGCACTGAAT TCCTGTTTCT GCAACGCAAC
AAACTGCCGG ACGAAGAAGA ACAGTTCCAA ACATACCGCG ACACTGTACT ACGTATGAAC
GGACGCCCAG TCACCATCCG CACACTAGAT CTGGGTGCAG ATAAAACCGA CTGTACCGGC
CTGACTCTCA GTAACGAAGA AAACCCAGCA ATGGGCCTGC GTGGGATACG CCTGTCGATG
GCACACCCCG CAGTGGCCAA CACACAATTA CGAGCGATCC TGCGCACCTC CACCTATGGG
CATGTCCGTA TCCTGGTCCC CATGATTAGC TGCCGAGAAG AGATCATCCT TCTACGCAAG
CAGATCAAAG CGCTCAGCAT CCAATTGCGC ACCGAAGGCC ACGACATTGC CGAGCAGGTT
CCCCTAGGAG CGATGATCGA AGTACCAGCT GCAGCAATCG CACTCAACAG CTTTATCAAA
GAAATCGACT TCCTATCGAT CGGTACCAAC GACCTGGTCC AATACCTATT GGCCGCCGAC
CGCAACAATG CGGCAATCAG CGAAATATAC TCCCCACTCC ACCCTGGCGT CCTGGCAGTA
CTGGCTCAGA TCATCGTCAC CGCACATACA CATGCCACCC CTGTCGCCAT CTGCGGTGAA
ATCGCTGGCG ATCCACATTA CGTGCCCATG CTTCTGGCAT TAGGTCTCAC AGAATTCAGC
CTTCACCCGG CCACATTACT TGAAGTACGC CGTGCAATCC GCAACAGCGA CCTGGGCACA
TTGAAAACAA GTGCAACCAC ACTGCTCCGC GCACGCGACC GGAAGAGCAT CGAAGAATGG
ATGGCGGCAC ACGCCAATAC GACACCGACA TAA
|
|---|
| Protein sequence | MPHSAHRSTP TLHTQMNVRL QGHGAARGTA LGRAWVRQMN IIEIQDKYIT DTNAELHSLY
QAMSAARQEI QVLRERMHGT LSHEVGEFLD LYTLLIDDPE LLRSLNELIL THNYSAEYAL
KIQRDHLTTE FEAMEDHYLK SRMDDLNHVL GRIHAFLKKH SPEPKDAAGE ILICNNIAPS
ELAQVQAQGI IGIVIAAGNT LSHSAILAHS LHLPLIVGAG DLLLQKITNG DMLIIDGNSG
EIIVNPSPQD LRHYHSRLRE RAKEQRELEQ LRSKHSRTRD NVDIVVQANA ESPDDVSQAY
TLGAAGVGLY RTEFLFLQRN KLPDEEEQFQ TYRDTVLRMN GRPVTIRTLD LGADKTDCTG
LTLSNEENPA MGLRGIRLSM AHPAVANTQL RAILRTSTYG HVRILVPMIS CREEIILLRK
QIKALSIQLR TEGHDIAEQV PLGAMIEVPA AAIALNSFIK EIDFLSIGTN DLVQYLLAAD
RNNAAISEIY SPLHPGVLAV LAQIIVTAHT HATPVAICGE IAGDPHYVPM LLALGLTEFS
LHPATLLEVR RAIRNSDLGT LKTSATTLLR ARDRKSIEEW MAAHANTTPT
|
|---|
| |