Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0734 |
Symbol | |
ID | 6120496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 785877 |
End bp | 787679 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641648792 |
Product | ATP-dependent DNA helicase |
Protein accession | YP_001775357 |
Protein GI | 170729924 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.792164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACGT CTTCCGCCAC CCAGACCGTT CTACAACGCG TCTTCGGCTA CGACACCTTC CGTGGGCCCC AGCAAGCCAT CATTGAGCAT GTCGCTGCCG GCCACGATGC CTTGGTCCTG ATGCCCACCG GGGGCGGCAA ATCATTGTGC TACCAAGTGC CTGCGCTGCT GCGCAAAGGC ATCGGCGTAG TCATCTCGCC GCTGATTGCA CTGATGCAAG ACCAAGTCGA GACCCTACGT CAGCTTGGCG TACGCGCCGC CTATCTCAAC TCGACCCTAG ATGCAACGCA GGCACAACGG ATCGAACACG CTCTAGTCAC CGCAGATCTA GACCTGCTGT ATATCGCTCC GGAACGGTTA CTCACTGCAC ACTTCTTATC GCTGCTGGAA CGTAGCCAGA TCGCTTTGTT CGCCATCGAC GAAGCTCACT GCGTCTCACA GTGGGGACAT GATTTCCGTC CCGAATACCG CCAACTCACC GTACTTCATG AACGCTGGCC ACACGTGCCT CGGATTGCAC TGACCGCAAC CGCCGACCCA CCCACACAAC GCGAAATTGC TGAGCGCCTT GACCTAAGCG ATGCGCATCA CTTCATCAGC TCATTCGACC GCCCCAACAT CCGCTACACA GTCGTACAGA AAAACAATAT GCGGCGCCAA CTACAAGAAT TCCTCAGCCG CCATCGCAAC ACCGCAGGCA TTGTCTACGC CATGTCACGG CGCAAAACCG AAGAAATCGC CGCCTATCTG TGTACACAAG GCTACAACGC ACTGCCTTAC CATGCCGGCC TACCAGCCGA AACACGGGCC AAGCACCAAC GCTGCTTTCT GCGTGAAGAA GGGATTGTGA TGTGTGCCAC CATCGCCTTC GGCATGGGCA TCAACAAACC TGATGTCCGC TTTGTCGCCC ACATCGACCT CCCCAAATCA CTGGAGGGTT ATTACCAGGA AACCGGCCGC GCCGGCCGCG ATGGCGAAGC TGCAGAAGCA TGGATGTGCT ATAGCCTGGG AGACGTCGTA CTGCTGAAAC AAATGATCGA ACAAAGCGAA GCCAGCGAAG CACGCAAGTG CGTAGAACGC GCCAAACTCG ATCACCTGCT GGGCTACTGT GAATCAATGC AATGCCGCCG CCAACTCTTA CTGTCAAGCT TCGGGGAAAC CTATCCAAAC CCCTGTGGCA ACTGTGACAA CTGCCTGACC CCAGCCACCG CCTGGGATGC CACCGTGCTC TCCCAAAAGG CGTTAAGTTG CGTCTACCGC ACTGGCCAGC GCTTCGGGGT TGGCCACCTA ATCGACATAC TACGTGGCAG TAAGAGCCAA AGAATATTGC AACTGGGTCA TGACCAACTC AGCACCTACG GCATCGGCCG TGACGTGGAT GAACGCAGCT GGCGCAGTGT CTTTCGCCAA CTCATCGCCA CACACCTGTT GGAGGTCGAC AACGAAGGCT ACGGCGGCTT ACGCCTGACC CCAAGCAGTC GTCCAGTCCT CAAAGGCGAA CGCCAAGTCA TGATGCGTCG TGATCAGTTC ATCCGTGAAC GCGACCGTAC CGGCCAACGT CACGGACTAT CGGTCCTCCC GGAAGATCTG GGACTCTTCA ATGCCCTGCA TCGCTTACGT GCACAACTAG CCAAAGAACA AAACGTGCCG GCATTCGTGA TCTTCCATGA CAGCACCTTG CGCCATATTG CCGAGCAACG CCCTACTAAC CTCAATGCAC TGAGCAAAAT CAGCGGGATC GGCAGCAACA AACTGACACG CTATGGCCAT CAGTTAATTG AACTCGTACT TGCGCAAGGG TGA
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Protein sequence | MSTSSATQTV LQRVFGYDTF RGPQQAIIEH VAAGHDALVL MPTGGGKSLC YQVPALLRKG IGVVISPLIA LMQDQVETLR QLGVRAAYLN STLDATQAQR IEHALVTADL DLLYIAPERL LTAHFLSLLE RSQIALFAID EAHCVSQWGH DFRPEYRQLT VLHERWPHVP RIALTATADP PTQREIAERL DLSDAHHFIS SFDRPNIRYT VVQKNNMRRQ LQEFLSRHRN TAGIVYAMSR RKTEEIAAYL CTQGYNALPY HAGLPAETRA KHQRCFLREE GIVMCATIAF GMGINKPDVR FVAHIDLPKS LEGYYQETGR AGRDGEAAEA WMCYSLGDVV LLKQMIEQSE ASEARKCVER AKLDHLLGYC ESMQCRRQLL LSSFGETYPN PCGNCDNCLT PATAWDATVL SQKALSCVYR TGQRFGVGHL IDILRGSKSQ RILQLGHDQL STYGIGRDVD ERSWRSVFRQ LIATHLLEVD NEGYGGLRLT PSSRPVLKGE RQVMMRRDQF IRERDRTGQR HGLSVLPEDL GLFNALHRLR AQLAKEQNVP AFVIFHDSTL RHIAEQRPTN LNALSKISGI GSNKLTRYGH QLIELVLAQG
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