Gene Xfasm12_0724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0724 
Symbol 
ID6120486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp775171 
End bp776205 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content51% 
IMG OID641648783 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001775348 
Protein GI170729915 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.675858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCAT CCAAATCAGA TCGTTGTTTT AACATTGCCA TCGTTGGCGC TACTGGCGCA 
GTGGGCGAGG CCATGCTTTC GATCTTGGAA GAGCGTCATT TCCCGGTTGC GAAGCTGATT
CCTCTTGCTT CGGCGCGCTC GACGGGTTCT CAGATCACCT TCAAGGGCGA GAGCATCAAC
GTATTGGAGC TGGAGCACTT TGATCCGCAT GGTGTAGATA TTGCATTGTT TTCTGCTGGC
AGCAGAGTCT CTGAAGCGTA TGCGCCACAG TTTGCGGCTG CTGGTGTGGT GGTCATCGAT
AATTCTTCCG CGTTTCGTTA CGAGGAGGAT GTGCCGTTAG TCGTATCGGA GGTGAACCCT
CATGCGTTGA AGCAGCGGCC GCGTGGCATC ATTGCTAACC CGAATTGTTC GACCATGCAG
CTCATGCCGG TGCTGGCGCC AATCCACCGG GAATATCGCA TTGAGCGTAT CAATGTTGCC
ACCTATCAAT CCGTGTCTGG CGGTGGCCGC TCGGCGCTTG AAGAATTGGG ACAGCAGACT
GCACAGTTAT TAGCCTTTCA AGAGATCAAC CCAAAGCGAT TTCCTGTACA AATTGCTTTC
AACTTGATTC CGCATATCGA CGATTTTCAG TCTAACGGCT ATACCAAAGA GGAGATGAAA
TTGGTTTGGG AGACAAAGAA GATTCTTGAG GACAGCAGCA TTCAGGTGAA TCCAACGGCG
GTGCGTGTAC CAGTGTTTTT TGGTCATTCC GAAGCTGTCA ATATCGAAAC GCAAAAGAAA
GTCACTTCTG AGCAGGCACG TGCGTTGCTA GCCAGTGCAC CAGGTGTTGA GGTTGTTGAT
GAGTGGCAGC CTGGCGGTTA TCCGACTCCT GTGACCCACG CTTCCGGCAA AGATCCTGTG
TTTGTTGGTC GGATTCGTGA TGATTTATCA CATCCACGCG GCCTGAACCT GTGGGTAGTT
GCCGACAACA TCCGTAAGGG GGCTGCGCTT AATGCAATAC AGCTTGCTGA ACTAGTGACG
GGCGAGACGA TTTGA
 
Protein sequence
MSSSKSDRCF NIAIVGATGA VGEAMLSILE ERHFPVAKLI PLASARSTGS QITFKGESIN 
VLELEHFDPH GVDIALFSAG SRVSEAYAPQ FAAAGVVVID NSSAFRYEED VPLVVSEVNP
HALKQRPRGI IANPNCSTMQ LMPVLAPIHR EYRIERINVA TYQSVSGGGR SALEELGQQT
AQLLAFQEIN PKRFPVQIAF NLIPHIDDFQ SNGYTKEEMK LVWETKKILE DSSIQVNPTA
VRVPVFFGHS EAVNIETQKK VTSEQARALL ASAPGVEVVD EWQPGGYPTP VTHASGKDPV
FVGRIRDDLS HPRGLNLWVV ADNIRKGAAL NAIQLAELVT GETI