Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0669 |
Symbol | |
ID | 6119354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 717320 |
End bp | 718270 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641648732 |
Product | rod shape-determining protein MreC |
Protein accession | YP_001775297 |
Protein GI | 170729864 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.111553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCCTCCT ACCCCGGTTT TTCATTAGCG TCTCGTTCGC CAGCAGTTGT CAGCACAATA CGTTTGCTGA CTTACTTAAC CTTGGCAATT GTGTTGGTTG TGCTCGACAG TCGCGGCGCT TGGTTGTCGC AGTTGCGTCA GCGGGCTAAC TGGCTGGCGC AGCCGGTGTG GGCGCTGGCT GGGTTGCCTG GTTGGTTTGG TGGTCAGCTC AGTGAGCGTG CAATCAGTAA TGCGCGTTTG GTTAACGAGA ACCGTCAGTT GCGCAATCAG CTGTTGATTG CGAATGCGCG TTTGACCCGA TTGCAAACGG CAGCACGTGA CAATGCCCAG TTGCGTGAGT TGCTTAATTT TGCTGAGCAT CACGGTCTGG ATGTGCAGTT GGCGCCGATT CTGGATGTTG ATTTGGATCC AACTCGGCAG CGTCTTGTTC TGGATGCCGG CAGCCGTGAT GGTGTCAGCG TCGGTCAAAC GGTGATTGAT GCTGGCGGTT TAATGGGTCA GGTGATTGAG GTGACGCCGC TGCATTCAAT TGTGCTGCTG TTGACCGATC CGGATCACGC TGTGCCGGTG ACTGTGGCAC GTAATGGTGT TCGCTTGATT GTTTATGGGC GGGGGGATCG CTTAGAGCTG CGCAATATTC CGCTGAGTTC AGGTGTGAAA ATTGGTGATG TCCTTATTAC TTCAGGGCTG GGAGCGCGTT TCCCGGCTGG TTTCCCTGTG GGCAATATTT CAGCACTGCA CCCGGATGAT AGCCATGCTT TTCTAGTTGG GGAGATCACG CCGGCAGCCA AGTTGGATCG AGGTCGTAAT GTACTGTTGT TGCGCTTGGG TGCGTCCATG TCACCTGGTG GTGGAGGGTC GTTAACATCA AGATCTATTA TTGACTCAAA CAGTGAGTCT CACTCCACCA ACCTTGGCGC TTCCAGGGTA ATCAAGGAGC CGCAGCAATG A
|
Protein sequence | MPSYPGFSLA SRSPAVVSTI RLLTYLTLAI VLVVLDSRGA WLSQLRQRAN WLAQPVWALA GLPGWFGGQL SERAISNARL VNENRQLRNQ LLIANARLTR LQTAARDNAQ LRELLNFAEH HGLDVQLAPI LDVDLDPTRQ RLVLDAGSRD GVSVGQTVID AGGLMGQVIE VTPLHSIVLL LTDPDHAVPV TVARNGVRLI VYGRGDRLEL RNIPLSSGVK IGDVLITSGL GARFPAGFPV GNISALHPDD SHAFLVGEIT PAAKLDRGRN VLLLRLGASM SPGGGGSLTS RSIIDSNSES HSTNLGASRV IKEPQQ
|
| |