Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0659 |
Symbol | |
ID | 6119344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 708789 |
End bp | 709985 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641648722 |
Product | transposase OrfB |
Protein accession | YP_001775287 |
Protein GI | 170729854 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATGG CCCACCGTAT TGCACTGGAC CCTAACAATG TGCAGGCGAC CCACCTGTCG CGTGTGGCAG GTGTGGCCCG TTTTGCCTAT AACTGGGCGT TAGCCGAATG GAGGCATCAA TATGAAGCAT GTACGTTGGA CAGTGCCCTT CCCAAGCCAT CGCAACATTC CTTGCGGCGG CAACTGAACG CGATCAAGCG CGAGCAGTTT CCATGGATGG GCGAAGTCAC CAAGAACGCG CCTCAAATGG CGATCATCCA GTTGGGGCAG GCGTTTCAGA ACTTCTTCAC AGGTCGTGCC AAGTATCCGA AGTTCCGTAA AAAGGGCGCG CATGACCGAT TCACGCTGAC CAATGACCAG TTTGACCTTA ACGCTTCACG CATTCGCATT CCTCGGCTGG GCTGGGTGCG CATGCGTGAG ACGTTGCGCT TTGCCGGCAG AATCATGTCG GCCACCGTGT CGCGTGTGGC TGCACGTTGG TTTGTTAGCA TCACCGTGGA CGTGCCCGAT CCATCACATC TACCTCAAGC TGAAAACCAA GGCGCGGTGG GTGTTGATCT GGGTGTGTTG GCGCTGGCAA CGCTCTCAAC CGGAGAAACA ATCTGTGGCC CCAGGCCCCA CAGGGCACTG CTGGGTCGCG TGCGCAGGCT TTCACGCAGT GTGTCGCGTA AAGTCAAAGA TTCTGCCAAT CGTCACAAAG CCAAAGCCAC ATTGGCGCAT CTACATGCAC GGATTGCAGC AATTCGCTTA GATGCACTGC ACAAACTCAC CAGCGATCTT ACCCGGCGCT TTCACACCAT TGGCATTGAG AACCTGAATG TCAAAGGCAT GGTTAAGAAT CGCCATTTGG CACGTTCCAT CGCCGATATG GGCTTTTTTG AATTCAGGCG GCAGCTTGAA TATAAGGCGG CGATGCGTGG TGGGCAGGTT GTGGTGGCTG ATCGTTTCTT TGCCAGTAGC AAGATGTGCT CGACGTGTGG GCACACGCTC AAGGAATTGC CGCTCTCGGT GCGCCAGTGG GCGTGTTTGG GGTGCGGTAC ACGTCATGAT CGCGACGTGA ACGCTGCGGT TAATTTGAAG AACATGGCCG TGAGTTCCAC GGTATCAGCC TGTGGAGAGG AAGGCACTGG CCCTCGTCGC AAGACGGCGG TGAAACCGGC CTCGGTGAAG CAGGAAGTCA GCTTTGAATC TGTTTAA
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Protein sequence | MLMAHRIALD PNNVQATHLS RVAGVARFAY NWALAEWRHQ YEACTLDSAL PKPSQHSLRR QLNAIKREQF PWMGEVTKNA PQMAIIQLGQ AFQNFFTGRA KYPKFRKKGA HDRFTLTNDQ FDLNASRIRI PRLGWVRMRE TLRFAGRIMS ATVSRVAARW FVSITVDVPD PSHLPQAENQ GAVGVDLGVL ALATLSTGET ICGPRPHRAL LGRVRRLSRS VSRKVKDSAN RHKAKATLAH LHARIAAIRL DALHKLTSDL TRRFHTIGIE NLNVKGMVKN RHLARSIADM GFFEFRRQLE YKAAMRGGQV VVADRFFASS KMCSTCGHTL KELPLSVRQW ACLGCGTRHD RDVNAAVNLK NMAVSSTVSA CGEEGTGPRR KTAVKPASVK QEVSFESV
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