Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0479 |
Symbol | |
ID | 6119543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 534708 |
End bp | 535397 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641648549 |
Product | NonF-related protein |
Protein accession | YP_001775119 |
Protein GI | 170729686 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATA ACATCAAACC CATCCTGTGT GTAGTGACCA GTCATCCGAT CCGCGGCGAT AGCGGTGAGC CTACAGGGTT CGCGATGGTT GAACTCACCC ATCCGCTTGA GGTCTTTGAA GCAGCGGGTA TCCTGGTGGA GATCGCTTCC ATCCGTGGTG GCCACCCACC GATCGACTTC TTTGATCTTT CCGACCCAGT CAATGATCGT TTTTGGAAGA ACAAAGCGTT CCGTCACGCG CTCGCTCACT CATTCGTTCT CGGCGACCTT GATCCGTTGC GTTACTCGGC GGTCTTTTTT GTTGGTGGTC ACGGTACGAT GTGGGACTTT GCTGACAGTC TGGCCGTGCA GAACGTAATC CGTGGTATTT GGGAAAGTGA CGGTATTGTT TCTGCGGTTT GTCATGGTCC TGCTGCTTTG GTGAATGCAA CACTCTCTGA CGGCAGTTAC CTCGTCGCTG GCAAGAAGGT TGCGGCCTTT ACCGACGAAG AGGAGACTGA GGTTAAGTAC GCTAATGTTG TGCCTTATTT GTTGGCTACC ACGCTGAAGC AGCGTGGTGC GCTACATCAG TCTGCTCCTA ATTGGGTTGA AAATGTCGTG GTCGATGGTC GCCTCATCAC CGGCCAGAAC CCAGCTTCGG CGTACGGTGT TGGCCAACGT GTAGTTGACC AGCTCAAGGC CAGTATTTGA
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Protein sequence | MTNNIKPILC VVTSHPIRGD SGEPTGFAMV ELTHPLEVFE AAGILVEIAS IRGGHPPIDF FDLSDPVNDR FWKNKAFRHA LAHSFVLGDL DPLRYSAVFF VGGHGTMWDF ADSLAVQNVI RGIWESDGIV SAVCHGPAAL VNATLSDGSY LVAGKKVAAF TDEEETEVKY ANVVPYLLAT TLKQRGALHQ SAPNWVENVV VDGRLITGQN PASAYGVGQR VVDQLKASI
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