Gene Xfasm12_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0479 
Symbol 
ID6119543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp534708 
End bp535397 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content53% 
IMG OID641648549 
ProductNonF-related protein 
Protein accessionYP_001775119 
Protein GI170729686 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATA ACATCAAACC CATCCTGTGT GTAGTGACCA GTCATCCGAT CCGCGGCGAT 
AGCGGTGAGC CTACAGGGTT CGCGATGGTT GAACTCACCC ATCCGCTTGA GGTCTTTGAA
GCAGCGGGTA TCCTGGTGGA GATCGCTTCC ATCCGTGGTG GCCACCCACC GATCGACTTC
TTTGATCTTT CCGACCCAGT CAATGATCGT TTTTGGAAGA ACAAAGCGTT CCGTCACGCG
CTCGCTCACT CATTCGTTCT CGGCGACCTT GATCCGTTGC GTTACTCGGC GGTCTTTTTT
GTTGGTGGTC ACGGTACGAT GTGGGACTTT GCTGACAGTC TGGCCGTGCA GAACGTAATC
CGTGGTATTT GGGAAAGTGA CGGTATTGTT TCTGCGGTTT GTCATGGTCC TGCTGCTTTG
GTGAATGCAA CACTCTCTGA CGGCAGTTAC CTCGTCGCTG GCAAGAAGGT TGCGGCCTTT
ACCGACGAAG AGGAGACTGA GGTTAAGTAC GCTAATGTTG TGCCTTATTT GTTGGCTACC
ACGCTGAAGC AGCGTGGTGC GCTACATCAG TCTGCTCCTA ATTGGGTTGA AAATGTCGTG
GTCGATGGTC GCCTCATCAC CGGCCAGAAC CCAGCTTCGG CGTACGGTGT TGGCCAACGT
GTAGTTGACC AGCTCAAGGC CAGTATTTGA
 
Protein sequence
MTNNIKPILC VVTSHPIRGD SGEPTGFAMV ELTHPLEVFE AAGILVEIAS IRGGHPPIDF 
FDLSDPVNDR FWKNKAFRHA LAHSFVLGDL DPLRYSAVFF VGGHGTMWDF ADSLAVQNVI
RGIWESDGIV SAVCHGPAAL VNATLSDGSY LVAGKKVAAF TDEEETEVKY ANVVPYLLAT
TLKQRGALHQ SAPNWVENVV VDGRLITGQN PASAYGVGQR VVDQLKASI