| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0384 |
|---|
| Symbol | |
|---|
| ID | 6119595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 441042 |
|---|
| End bp | 442283 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641648457 |
|---|
| Product | lipoprotein releasing system transmembrane protein |
|---|
| Protein accession | YP_001775028 |
|---|
| Protein GI | 170729595 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAATC CGCTTTCTGT TGCGATCGGT TTGCGTTATC TGCGTGCCAA GCGGCGCAAT
GGTTTCATCT CGTTTATTTC AATGGCTTCC ATCCTGGGCA TTGCTCTGGG AGTGACTGTC
TTGATTACTA CCTTGGCAGT GATGAGCGGC TTTCAGAAAG AGATTCGTGA CCGATTGTTG
CAAATGGCTG CACACGCAAC GGTGAGTGCG CAGGGAGCAC CGATGCATGA TTGGCAGCAT
GCAGTTGCGT TGGCGATGAC TGATCCCCGC GTCGCTGGTG CTGCGCCGTA CATCGAGAGT
GAAGCGTTGC TCCAGGGGGA GCGTCATCAG CCTGCGATGA TGCGTGGCAT CGTGCCCAAC
CAGGAAGCTA AGGTTTCGGT GCTGGCGCAG AAATTGAAGG TTGGTTCAAT TGATAGTCTC
AAGCCCGGTG AGTACAACAT CTTGCTTGGT AAGGAGTTAG CCTTGTGGTT AGGCGTTGAT
GTCGGCGACA GCGTGATCGT GCTCCTCAGT CAAACTCAGA CCACTCCAGT GGGGACGATG
CCACGGATGA AGCGCTTCAC CGTCAGTGGC CTGTTTGAAG TTGGCTACAA CGAAATCGAC
CGTGGCTTAG CGGTGGTCAA TATGGAGGAT ATGCAGAAGA TCATGCGGAT GGACGGTGTG
ACCGGCGTGC GTTTGAAATT GCACGATATG GATCATGCCT GGGACGTTGC GAGTGACTTG
GCGGTCCGCC TGAATGGCCC CTATCTGGTG AGCGACTGGA CACGCGAAAA TGCCAATCTG
TACAGTTCAT TGAAGATGGA AAAAACGGTG ATGGGCATTT TGCTCTCCCT GATCATCGCG
ATGGGCGCCT TCAACTTGGT GTCCTCGCAG GTGATGTTGG TCACTGATAA GCAAGCCGAT
ATCGCCATCT TGCGCACCTT GGGTTTGTCG CCAGCAGGGG TGATGCGAGT ATTTATGGTG
CAGGGGTCGT TGATTGGCAT CATCGGTACG CTCTCTGGCG TGATCGGTGG TGTGGTGCTG
ACTTGGAATC TGGAGCGAAT CCTGAAATTG ATTGAATCCA CGTTCAACAT TACCCTGCTT
CCGGAGGATG TGTATTACAT CACTGGCCTG CCGACCGATA TGCAGTTCCC TGATGTGGTA
GTGATTACTC TGATGGCGTT GGCAATGAGT TTCATTGCCA CCTTGTACCC GGCGTGGCGT
GCCGCCAGGA TTCAGCCAGC AGAGGCGCTG CGTTATGAAT GA
|
|---|
| Protein sequence | MFNPLSVAIG LRYLRAKRRN GFISFISMAS ILGIALGVTV LITTLAVMSG FQKEIRDRLL
QMAAHATVSA QGAPMHDWQH AVALAMTDPR VAGAAPYIES EALLQGERHQ PAMMRGIVPN
QEAKVSVLAQ KLKVGSIDSL KPGEYNILLG KELALWLGVD VGDSVIVLLS QTQTTPVGTM
PRMKRFTVSG LFEVGYNEID RGLAVVNMED MQKIMRMDGV TGVRLKLHDM DHAWDVASDL
AVRLNGPYLV SDWTRENANL YSSLKMEKTV MGILLSLIIA MGAFNLVSSQ VMLVTDKQAD
IAILRTLGLS PAGVMRVFMV QGSLIGIIGT LSGVIGGVVL TWNLERILKL IESTFNITLL
PEDVYYITGL PTDMQFPDVV VITLMALAMS FIATLYPAWR AARIQPAEAL RYE
|
|---|
| |