Gene Xfasm12_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0352 
SymbolrnhB 
ID6119559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand- 
Start bp409457 
End bp410161 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content54% 
IMG OID641648425 
Productribonuclease HII 
Protein accessionYP_001774999 
Protein GI170729566 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.227489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTCCC AGTTTGATAC ACAACATCTC CTCAATAGCA ACACGGCACT TGTCGCTGGC 
GTCGACGAAG CCGGACGTGG CCCCCTCGCC GGACCAGTCG TCGTTGCAGC AGTCGTATTC 
GATCCCTCAC AACCACGCAT CAACGGCCTT AATGATTCCA AACAATTGTC CCCTGCATGC 
CGTGAACGTC TCTACGCTCA CATCGTTGAG CGCGCCTTGG CCTATAAAGT GGTCATGATC 
GACAGCACAC AGATCGATAC ACTGAATATT TACCAAGCCA CCATGCTCGG TATGCGCTTA 
GCGGTAGAAG GCGTCGCTCA CGTTGCCAAA TCCGCGAGAA TTGATGGCAA CCGTCTCCCT 
AAAAACCTCC CCTGCCCGGC TGAAGCTCTG GTCGGCGGTG ACGCACGTGA TCCCACAATC 
ATGGCCGCTT CCATACTGGC CAAAGTCACC CGCGACCGCC ATATGGTTGA ACTGCATCTG 
CAATATCCAC ATTACGGCTT CGACAAACAC AAAGGGTACG GAACACCGGC ACACCTGGCC 
GCTTTAGCAG AGCATGGCCC ATGTCTAGAG CACCGCCAAA GCTTCGCTCC AGTGCGCAGA 
ATGCTGACCC CTAAAGCCAT CCACGCAAGA CAATCAGCAC ATCAACACAA TGATAACTCA 
CCTACTAAAG CAGCCTTTAA CATGCTCATA GAACGCGATG ATTGA
 
Protein sequence
MVSQFDTQHL LNSNTALVAG VDEAGRGPLA GPVVVAAVVF DPSQPRINGL NDSKQLSPAC 
RERLYAHIVE RALAYKVVMI DSTQIDTLNI YQATMLGMRL AVEGVAHVAK SARIDGNRLP 
KNLPCPAEAL VGGDARDPTI MAASILAKVT RDRHMVELHL QYPHYGFDKH KGYGTPAHLA 
ALAEHGPCLE HRQSFAPVRR MLTPKAIHAR QSAHQHNDNS PTKAAFNMLI ERDD