Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0301 |
Symbol | |
ID | 6120604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 350071 |
End bp | 351882 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641648380 |
Product | gamma-glutamyltransferase |
Protein accession | YP_001774954 |
Protein GI | 170729521 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTAT TTCCTCGTTG TTTCTTGTTG CTCTGCGTTT TTTTCTCGCA CGTCTCTGCA GAGCAGAGAG AGGTAGGACT GTTACGGGAG GGAGTCGCCA GAGTCCCGCC TGGTGCAGTG ATTGCCAGTA GTCATTATTT GGCGACGGAT GCTGGGCTGC AGATTCTGAA GCAGGGTGGG AATGCTTTCG ATGCTGCAGT GGCGGTGTCT TCCACGCTGT CGGTGGTTGA ACCCATTAGT TCTGGTTTGG GCGGCGGTGG CTTTTTTCTG CTTCATGATG CCAAGACGGG GCGTGATGTC ATGCTGGATG CGCGGGAATA CGCGCCGGCG TCGGTTAATC TGGGTACGTT TCTAAACAAG GATGGTCAAC TGGATCATGA CCGTTCGATC AACGGGCCTT GGTCGGCAGG TATCCCGGGG TTACCGGCAG CACTTGTTGA ACTAGCTGAG CACTATGGCA AGTTGCCATT GAGACAAACA TTGGCACCGG CTATCCGCAT TGCGTCTGCA GGGTTTCCTG TGTACAGGCG TATGGTGGAG GGGTATCAGT CGCGCCGTGA AGTGATGGAG CGTTATCCGG GGACACGTGA GGTCTATCTC CGTGGCGGTA AGCCGATGGA TGAGGGTGAT ATTTTCAAAC AGCCGGAATT GGCGCGGACT TTGTTGTTAT TGGCCAATAA GGGCTTTGAT GGTTTTTATA AGGGTGAGAC TGCGCAGCGG TTGCTGGCTG GGGTGAATCG GGCGGGGGGA CGTTGGACTG CTGAGGATTT GGCCGGTTAT CGGGTCAAGT CGCGTGTTCC CATCACGTTC GATTATCGAG GGTGGAAGAT CACCACTGCG CCGCCGCCGT CTTCTGGCGG TATCGCGTTG GCGGAAATGT TACAGATCTT GGAAGGTTGG GATCTGAATC GGCTAGATGA TGTGCATCGC GTTCATTTGG TGGTAGAAGC GATGCGCCGT GCGTATCGGG ACCGTACTTT TTTTCTCGGT GATCCCGATT TTGTGTCGAT TCCGCAGCGT GTGTTGACGA GTAAGGACTA CGCGTGTGGT TTGCGTGCGG GGATTAACCC TGAGAAGGCA ACGCCTAGCG TGTTGTTATC AGGTCATCCA ACGCCATTGG AGGATGAGGA GACGACGCAC TTTTCAATCA TTGATGCGGA GGGAAACCGA GTGGGTGCGA CGCAAACGGT TAATTTGCTA TACGGTTCGG GGCTGATTCC GAAGGGAACC GGTGTGTTGC TTAACAATGA GATGGATGAT TTTGCACTCC AGCCAGGCGT ACCGAATGTG TTCGGGGTGA TGGGCTACGA GGCGAATGCA CCAAAGCCAG GGAAGCGCAT GCTCAGCTCA ATGACGCCGA CTTTCCTTGA ATCTGCCGAT AAAGTGGCGG TGATTGGCAC GCCTGGCGGC AGTCGTATTA TCACAATGGT GCTGTTGGGG ATCTTGGGTT ACGACGCTGG ATTGGACGCG CAACAGGTTG CTGCGTTGCC GCGGTATCAC CACCAATGGT TGCCGGACGT CATTGAGACG GAGGCGGCTA CGTTTCCGGC AGAGGTGATC AAGGGATTGG AGACGATGGG GCATACGATC AAGCAGCCAA GCGATACGGT TGCCGGTGGG CGTGGTTCCA GCCACGTTTG GGGCAATGTG CAGACGGTTG AATGGGATCG TCGTTCTAAT GTGCTCATTG GCGGTCATGA TCCGCGTCAT GTTGTGGGCA AAGCGGTCGT TTGGCTCACT GATAAAGCGG TTGTTCTGCC GCCTATGGAC CATTTACCTA CGCCGTGCTT GCAGGATTGC CATGCTCAAT GA
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Protein sequence | MSLFPRCFLL LCVFFSHVSA EQREVGLLRE GVARVPPGAV IASSHYLATD AGLQILKQGG NAFDAAVAVS STLSVVEPIS SGLGGGGFFL LHDAKTGRDV MLDAREYAPA SVNLGTFLNK DGQLDHDRSI NGPWSAGIPG LPAALVELAE HYGKLPLRQT LAPAIRIASA GFPVYRRMVE GYQSRREVME RYPGTREVYL RGGKPMDEGD IFKQPELART LLLLANKGFD GFYKGETAQR LLAGVNRAGG RWTAEDLAGY RVKSRVPITF DYRGWKITTA PPPSSGGIAL AEMLQILEGW DLNRLDDVHR VHLVVEAMRR AYRDRTFFLG DPDFVSIPQR VLTSKDYACG LRAGINPEKA TPSVLLSGHP TPLEDEETTH FSIIDAEGNR VGATQTVNLL YGSGLIPKGT GVLLNNEMDD FALQPGVPNV FGVMGYEANA PKPGKRMLSS MTPTFLESAD KVAVIGTPGG SRIITMVLLG ILGYDAGLDA QQVAALPRYH HQWLPDVIET EAATFPAEVI KGLETMGHTI KQPSDTVAGG RGSSHVWGNV QTVEWDRRSN VLIGGHDPRH VVGKAVVWLT DKAVVLPPMD HLPTPCLQDC HAQ
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