| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0281 |
|---|
| Symbol | |
|---|
| ID | 6120584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 326285 |
|---|
| End bp | 327790 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641648360 |
|---|
| Product | NADH dehydrogenase subunit M |
|---|
| Protein accession | YP_001774934 |
|---|
| Protein GI | 170729501 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.540456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGAATT GGCCTCTACT GTCTGTCTTA ATTTGGCTGC CGATCATTGG TGGCCTCTTG
ATTATGGGGT TGCGCAACGC CCATGTTGCT CGTTGGGCAG CGTTAGCGGT CGCGCTGGCT
ACCTTTGGAT TCAGTCTGCA CTTGTTGGGT GGTTACGATA TTGCTAAAGA TGCGTTGCAG
TTTGTTGAGC AGCATGTCTG GATTCAGACA TATAGTATTG GTTACAACCT TGGTGTAGAT
GGCATCGCGG TCGCGCTGGT GCTGTTGACA ACGTTGGTGA CGGTATTGGT ATTGATCGGT
TCTTGGGGAG CGATTAATCA GCGTGTTCCC CAATACGTGG CGGCGTTTCT CATTCTTGAA
GGGGTGACAA TCGGTATCTT CGCTGCGACG GACGCAATGC TTTTCTATGT GTTCTTCGAG
GCGATGTTGA TTCCGATGTT CTTGATCATC GGTGTCTGGG GTGGTCCACG TCGTATCTAT
GCAGCGATCA AGTTTTTTCT TTATACCTTT CTCGGTTCGG TGTTGATGTT GGTTGGCTTG
ATCTACCTGT ATTTGAAGGG GGGGAGTTTT CAGCTGGCTG ACTTGTATGC AATGCAGCTC
AGTGCCAAAG AGCAGACATG GTTGTTCTTT GCGTTCTTGA TTGCTTTTGC GGTCAAGGTC
CCAATGTTCC CCGTGCATAC GTGGTTGCCG GATGCTCACG TGGAAGCGCC GACTGCAGGT
TCAGTGATCC TGGCGGCGAT TGCGTTGAAG ATTGGTGGCT ACGGTTTCTT GCGTTTCAAT
CTGCCGATTG TCCCTGATGC GAGCCACGAG TTCGCTTGGG TGGTTATTGC GTTGTCTTTA
ATTGCGGTGA TCTATGTCGG CTTGGTTGCG TTAGTACAGG AGGATATGAA GAAACTGATT
GCCTATTCTT CAATTGCGCA TATGGGCTTC GTGACGTTGG GCATCTTCAT TTCCTTCACC
TTGGCACGTG ATTTTGGTAA TACAGATGCT GCGCGCCTTG GGCTACAGGG GGCAATGGTG
CAAATGATTT CGCATGGCTT TGTTTCTGGT GCGATGTTCA CTTGTATTGG CGTACTGTAC
GATCGCCTGC ATACCCGTCG TATCGCTGAT TACGGTGGTG TCGTGAATGT GATGCCATGG
TTTGCAACGT TTGCCATGTT GTTTTATATG GCCAATGCGG GTTTGCCGGG AACCAGTGGT
TTCGTTGGTG AGTTCATGGT GATCCTTGCT AGTTTTCAAA AGCACCCATT GGTGGCGTTT
GGTGCAGGGG CGACTTTGGT CATTACTGCT GCCTACACGC TGTGGCTGTA TAAGCGTGTG
TTTTTTGGGG AGGTGGCTAA TACGCATGTC GCTGCATTGA AAGATATTAA TATTCGGGAA
GCTTCCATAC TCGTTCTGTT TGCGATTGGC GTGTTGGTGT TGGGGCTGTA TCCCAAGCCG
CTTATTGATT TGATGGATTC TTCCATTGCC AAGCTCACTA CTCAGATTGC CGTGAGCAAG
CTGTGA
|
|---|
| Protein sequence | MSNWPLLSVL IWLPIIGGLL IMGLRNAHVA RWAALAVALA TFGFSLHLLG GYDIAKDALQ
FVEQHVWIQT YSIGYNLGVD GIAVALVLLT TLVTVLVLIG SWGAINQRVP QYVAAFLILE
GVTIGIFAAT DAMLFYVFFE AMLIPMFLII GVWGGPRRIY AAIKFFLYTF LGSVLMLVGL
IYLYLKGGSF QLADLYAMQL SAKEQTWLFF AFLIAFAVKV PMFPVHTWLP DAHVEAPTAG
SVILAAIALK IGGYGFLRFN LPIVPDASHE FAWVVIALSL IAVIYVGLVA LVQEDMKKLI
AYSSIAHMGF VTLGIFISFT LARDFGNTDA ARLGLQGAMV QMISHGFVSG AMFTCIGVLY
DRLHTRRIAD YGGVVNVMPW FATFAMLFYM ANAGLPGTSG FVGEFMVILA SFQKHPLVAF
GAGATLVITA AYTLWLYKRV FFGEVANTHV AALKDINIRE ASILVLFAIG VLVLGLYPKP
LIDLMDSSIA KLTTQIAVSK L
|
|---|
| |