| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0234 |
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| Symbol | |
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| ID | 6119736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 272989 |
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| End bp | 275985 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641648315 |
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| Product | serine protease |
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| Protein accession | YP_001774891 |
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| Protein GI | 170729458 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.249897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA TGAAAACGAC ATTTTTTCCC GGTAGCATCC TGGTATTAAC GTTAGTTGCT
TTCTTGAGTG CTTGTGGTGG TAGCGGGTTA GTTCGTCCGC CAACGCCAAC GCCAACGCCA
ACGCCAACGC CAACACCAAC ACCAACACCA ACACCAACAC CAACGCCAAC GCCAACGCCA
ACGCCAACGC CAACGCCAAC GCCAACGCCA ACGCCAACGC CAACGCCAAC ACCAACACCA
ACACCAACAC CAACACCAAC ACCATTGCCT GATTTGGATC CGGCGTTAGC TGCCAAGTTT
CGCGTGCACC TAGATGTTAC GAATACAGAA CCCGCTCATA CACTTGGCTT TACTGGCAAG
GGTTACATGA TTGGTGTGGT CGACTCCGGT GTGAATCGTA ACCATGTGAC GTTGCACGAT
CAGGTCATCC ACAACAATGT GTATGTGGAT TATCAAGACC CCGCCAGTCC AGATGATGTG
AGTGGCCATG GCACCAACGT GGCACAGCTC ATTGCGGGGC AACCCGTTGA ATACTGGCCC
GGTGGTATCG CACCAGGTGC GACTATCTTC TCAGCGCGCG TCTTCTCGTC TGCAGCAGAA
AGTGCAAAAG AAGGTCCAAT AGGCGGGAAC TTTTTTGAAG GAGAAGCAGC GCAGCTAAAA
CGCGTCAATG CCGACATGAT TGCCGCAGGA GTGCGTATCC AAAACAACTC CTGGGGATAT
GAGAATCAGA ACACCGGCGA TAAGCAAGTA TGGATAGATC CAGCGGTGAC AGATGGTTTC
GTGAACGTAT ACCGTGATTT AGTGCTGAAT AACAATGTCT TAGTGATCTT CGCCAGTGGT
AACTACAGTC AACAGCAACC GGGTCGACTT TCCAGATTGC CGAGCTTGCC CACTGTGGAG
GGGGGGGCAT CGCCTGCCGA TCTGGAAAGG GGATGGTTAG TGGTCGCTGC ACTGGATAGT
TTCGATCATC CCGACCAATT GACTTCGTAC TCGAACCATT GCGGCATCGC AATGCACTAT
TGCCTAGCTG CACCAGGTGA TCTCATTGAA ATCGATACTA ACGTTACGAC TAGCCCAGTG
GATGGTGATA AAGGTTATCT AAATGGTTAT TTAATACAGA ACGGCACCTC ATTTGCAGCG
CCGTTGGTCT CTGGTGCAGC GGCATTGGTA TGGGAGGCAT TTCCCTATTT CAGCAACGAC
CTGGTGCGGC AGACCCTGCT TGGCACGGCG ACTGATCTTG GTGCCCCTGG CGTGGATGAA
GTCTTCGGCT ATGGTGCACT GAATGTGGGT AAAGCAGTGC TGGGCCCGGC TAAGTTCGAT
TGGGGTGATG TCCAAGTCAG CTTCGATGAC AGGCGTTCCA CCTGGGGCAA TGACATCACC
GGCAGCGGCG GCTTGATCAA GCGTGGTACC GGAACACTGA TGCTTGGCGG CAGCAATAAT
CAATACACCG GAGCCACCCA AGTCCTGGGA GGTACATTGC AAGCGTCCAG CTTGGGTGCA
TCCGCAGTTA GCGTTGCTAA TACTGCGACG TTGATTGGTA GCGGTCGCTT CGGCGGTGCG
GTGAGCAATG CCGGCACCCT GGAGCTTGGG AAGGATGGGC TCAAGGTGCA GGGTGATTAC
ACCCAATTGG AGACAGGGCG TCTTGCACTG TACGTTGGAG ATCAGCTGAG CGTGGCCGGT
AATGCCACCC TGAAAGGGGG GGAACTCCAA GTGTTGGGTA AACGTGATTA TGTGACCTTC
AATACTTCCT ACAGCGTATT GCAGGCTGAT GGTAGTTTGA CCGGCACGTT CTCGCAGTTG
ACCTGGGGTC CGGCTGTGCT GCTTGGAGAA GGTCGTCTGA CCTACGGCGC TAACAATGCC
TACGTGACCC TGCAGCGTCT GAATGTCAGC GCGGCGGCAC AGGCCTTGGG GATCGTTGAT
AGAGTTGCGC AGGCCTCTGC CCAGCGTGTT GAGCAGGCAT TTCGTGCAAT TGATGCACAG
CAGGCGCAAG GCCGCGGTGC GTTGCCCACC AGTTTTATTG GGGCGGCGGC GGCATTGCAA
CAGTCCAGTA GCGCGGCAGT GGCGGCGGGT TCGTTGCAGA GTTTGTCGGG GCAATCGCAT
GTTGCGGCGG CGGCGGCTAG CCTTGATGCA ATCGATTTGG GGCGCCGCAG TTTGGCGACG
CGTCTAGATG TGCTTCGTTC GGGCGAGCGT ATTGTGACGT GGCATCAAGC CTTGGGTGGT
CCGGGGCAGA ATGGTGCGGC TAGCGGCACC TTCTCCCTGT CTGGCTGGTT GGTGGGACAT
GATGCGCAAC TTGCCTCCGG TGACATTGTG GGTGTTGCTT TTGGTCAGGC CGATAGCAGC
CCCTCCGGTA GTGCCTCTGG GTTGCGAGGG ATAGACAGAC AAGTGCAAGG GCGTGTGTAT
TTGCAGCGCA CCCAGGGGCC CTTGTATGTT TTGGGGCAGC TTGGTTTTGG TAGTTTCCAA
CGTCGTCTGG ACCGGCAGTT GCAACTGGGT GATTGGAACG ATTGGACATC CAGTCGCTAC
AGCGGTCAGT TTTGGAGTGG CAGTGTGGAG GCTGGCTATC ACTGGCGTCA GGGTTCCTTG
GCATTGACCC CGTATCTTGG TCTGGATCAA ACGCAGTTGC GGACGGATGG ATTCCGTGAG
CAGAGTGGCT CTGGCTTTGG CTTACAGGTG CAGTCCGCCC AAGCGACGCG GAGTCAGTTA
CTGGCCGGTG TGCGTACGGA GTGGCGCTGG GGTGGCGTGC AATGGCGTGG TTATGGTGAA
TGGCAGCAGA CGTTGCGTCA GAGTGGTTTG AATCCACAGG CTAGCTTTAC AGCGACTTCG
TCGTGGACGC CGTTGGTGGC TTCGTCCTGG CCTGGTCGTT CTGGGGGTGT GCTTGGGTTA
TCGATGGTCT TGCCTGTCGG GGTGACCGCA GGTCTGTGGA CCATGGGGTT AGAGCATTAC
TTTGGTACAC GTAGCCGTGG GGAGAGTCTT GGTCTGCGTT ACCAGCTTGG TTTTTAG
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| Protein sequence | MKNMKTTFFP GSILVLTLVA FLSACGGSGL VRPPTPTPTP TPTPTPTPTP TPTPTPTPTP
TPTPTPTPTP TPTPTPTPTP TPTPTPTPLP DLDPALAAKF RVHLDVTNTE PAHTLGFTGK
GYMIGVVDSG VNRNHVTLHD QVIHNNVYVD YQDPASPDDV SGHGTNVAQL IAGQPVEYWP
GGIAPGATIF SARVFSSAAE SAKEGPIGGN FFEGEAAQLK RVNADMIAAG VRIQNNSWGY
ENQNTGDKQV WIDPAVTDGF VNVYRDLVLN NNVLVIFASG NYSQQQPGRL SRLPSLPTVE
GGASPADLER GWLVVAALDS FDHPDQLTSY SNHCGIAMHY CLAAPGDLIE IDTNVTTSPV
DGDKGYLNGY LIQNGTSFAA PLVSGAAALV WEAFPYFSND LVRQTLLGTA TDLGAPGVDE
VFGYGALNVG KAVLGPAKFD WGDVQVSFDD RRSTWGNDIT GSGGLIKRGT GTLMLGGSNN
QYTGATQVLG GTLQASSLGA SAVSVANTAT LIGSGRFGGA VSNAGTLELG KDGLKVQGDY
TQLETGRLAL YVGDQLSVAG NATLKGGELQ VLGKRDYVTF NTSYSVLQAD GSLTGTFSQL
TWGPAVLLGE GRLTYGANNA YVTLQRLNVS AAAQALGIVD RVAQASAQRV EQAFRAIDAQ
QAQGRGALPT SFIGAAAALQ QSSSAAVAAG SLQSLSGQSH VAAAAASLDA IDLGRRSLAT
RLDVLRSGER IVTWHQALGG PGQNGAASGT FSLSGWLVGH DAQLASGDIV GVAFGQADSS
PSGSASGLRG IDRQVQGRVY LQRTQGPLYV LGQLGFGSFQ RRLDRQLQLG DWNDWTSSRY
SGQFWSGSVE AGYHWRQGSL ALTPYLGLDQ TQLRTDGFRE QSGSGFGLQV QSAQATRSQL
LAGVRTEWRW GGVQWRGYGE WQQTLRQSGL NPQASFTATS SWTPLVASSW PGRSGGVLGL
SMVLPVGVTA GLWTMGLEHY FGTRSRGESL GLRYQLGF
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