| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0220 |
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| Symbol | |
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| ID | 6119722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 259085 |
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| End bp | 260914 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641648302 |
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| Product | ATP-dependent RNA helicase |
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| Protein accession | YP_001774878 |
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| Protein GI | 170729445 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.986223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATC CATCTTCTAC ACCGCTGCTG TTTGCAGATC TCGGCCTCTC CGATGCTGTG
ATGCAAGCCG TCACAAAAAT CGGCTACGAA ACTCCGTCGC CCATCCAGGC GGCGACCATC
CCAGCCTTGC TTGCTGGGCG CGATGTGCTG GGCCAAGCCC AGACCGGCAC TGGGAAGACT
GCCGCATTCG CGCTACCGTT GCTCACACGC ACCGTTCTGA ACCAGGTCAA GCCGCAAGTG
CTCGTACTGG CACCCACCCG CGAACTGGCT ATCCAAGTTG CCGAAGCATT CCAGCGCTAT
GCTGCCTCGA TCTCTGGCTT CCGTGTCCTA CCCGTGTACG GCGGCCAATC CTATGGCCAA
CAACTGGCCG CACTGAAACG CGGTGTCCAT GTGATCGTCG GTACCCCGGG CCGGGTGATT
GATCACCTAG AGCGCGGCAC CCTGGATCTA TCGGAATTAA AAACGCTGGT CCTCGACGAA
GCCGACGAAA TGCTGCGTAT GGGTTTCATT GAGGACGTTG AAGAAGTCCT ACGGAAGTTG
CCCGCTTCAC GCCAGGTCGC TCTGTTCTCG GCAACCATGC CACCACAGAT CCGCCGTATC
GCACAAACCT ATCTACAAGA TCCGATTGAA GTCACCATCG CCACCAAAAC CACGACCGCA
GCCAACATCC GCCAACGTTA CTGGTGGGTC AGCGGCCTCC ACAAGCTAGA TGCACTCACA
CGCATTCTTG AGGTGGAAAC CTTCGACGCA ATGATTATCT TCGTGCGCAC CAAAGCTGCC
ACCGAAGAAT TGGCCGAGAA ATTGCAGGCA CGTGGCCTGA CCGCCGCAGC GATCAATGGC
GATATGCAAC AAGCGCAACG CGAACGCACC ATTCACCAAC TCAAAGATGG CAAGCTGGAT
ATCCTCGTTG CCACCGACGT CGCCGCACGT GGTTTGGACG TAGAACGTAT CAGCCACGTG
CTGAACTACG ACATCCCTTA CGACGTTGAG AGCTACGTCC ACCGTATCGG ACGCACTGGG
CGTGCCGGTC GCAGCGGCGA AGCAATCCTC TTTGTGACTC CGCGCGAAAA AGGCATGCTG
CGCCAGATTG AACGTGCCAC TCACCAACCG ATCGAAGCCA TGCAACTGCC CAGTGTGGAT
GCAGTCAACG ACACGCGCGT GACCAAATTT TTCGGACGCA TCAGCAATGC TCTGGTGGTC
GGCGCTGAAA TCGACTTCTA CCGCAAACTG CTACAACGTT TCGAGAGCGA GCACAATGTC
CCTGCCATTG AGATCGCTGC TGCCCTGGCA CGACTCCTTC AGGGGGATAG CCCCTTCCTG
CTGAGTGTCC CGACGCGCCC CCAACGCGAG CGCAGCGAGC TGGCATCCGA GCATCATGTC
AAACGCCCCT CATCCTTCAA GCAGACAGAG CGTCCAAACA ACACTGAACA CCCCAAGCGC
CCCCAACGCA ACGCACCTGC CCGCAATGTC CCAGAGTTCG GTATGGAGTC TTACCGCATC
GAAGTCGGCC GCATGCACGG TGTGAAGCCA GCCAATATCG TCGGCGCTAT CGCCAACGAA
GCTGGATTAG AGAGCCGCTA CATTGGCCGG ATTGACATCC GTGACGATCA CTCGGTTCTG
GATCTCCCCG CAGAAATGCC ACACGAGATC CTGCAACACC TAAAAAAGGT CTGGGTATCA
GGACAGCAAC TACAAATGCA TCGGATCGAC ACAACCGAAA CAACCGCACC TGCACGGGAA
TTTAAGTCAA AACCGGGTGG CGCTGGCAAA TTCCCGCCGA AACCGCATCA CAACAAATCA
ACCAAACCAA AACCACCATA CAGCGGTTGA
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| Protein sequence | MSNPSSTPLL FADLGLSDAV MQAVTKIGYE TPSPIQAATI PALLAGRDVL GQAQTGTGKT
AAFALPLLTR TVLNQVKPQV LVLAPTRELA IQVAEAFQRY AASISGFRVL PVYGGQSYGQ
QLAALKRGVH VIVGTPGRVI DHLERGTLDL SELKTLVLDE ADEMLRMGFI EDVEEVLRKL
PASRQVALFS ATMPPQIRRI AQTYLQDPIE VTIATKTTTA ANIRQRYWWV SGLHKLDALT
RILEVETFDA MIIFVRTKAA TEELAEKLQA RGLTAAAING DMQQAQRERT IHQLKDGKLD
ILVATDVAAR GLDVERISHV LNYDIPYDVE SYVHRIGRTG RAGRSGEAIL FVTPREKGML
RQIERATHQP IEAMQLPSVD AVNDTRVTKF FGRISNALVV GAEIDFYRKL LQRFESEHNV
PAIEIAAALA RLLQGDSPFL LSVPTRPQRE RSELASEHHV KRPSSFKQTE RPNNTEHPKR
PQRNAPARNV PEFGMESYRI EVGRMHGVKP ANIVGAIANE AGLESRYIGR IDIRDDHSVL
DLPAEMPHEI LQHLKKVWVS GQQLQMHRID TTETTAPARE FKSKPGGAGK FPPKPHHNKS
TKPKPPYSG
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