Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0182 |
Symbol | trpC |
ID | 6121172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 218610 |
End bp | 219404 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641648269 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_001774848 |
Protein GI | 170729415 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA TCCTCACTAA GATTCTTGCG CGGAAGGTGG AGGAGATTGC CGAGCGCCTT TTGCATGTCT CACAGGCTGA GTTGGTTGCG CGTTGTGCCG ATTTGCCGAC ACCCCGTGGT TTTGCTGCTG CGTTGCAGGC GACGATTGTG CATGGTGACC CAGCAGTGAT TGCTGAGATT AAGAAGGCCA GTCCTTCAAA AGGGGTGCTT CGCGAGGATT TTCGTCCTGC AGAGATCGCT ATCTCATATG AGCTTGGTGG TGCTAGCTGT CTATCAGTGC TGACGGACGT GCATTTCTTC AAGGGGCACG ATAATTATTT GAGTCAGGCG CGTGATGCTT GCACTCTTCC GGTGTTGCGC AAAGATTTCA CGATAGACCC GTATCAGGTG TATGAGGCAC GTGTGCTTGG TGCTGATTGT ATTTTGCTGA TTGTCGCTGC ATTGGACGAT GCTCAATTGG TTGATTTGTC CGGCTTGGCA TTGCAATTGG GAATGGATGT GCTGGTTGAG GTTCACGATA TTGACGAACT TGAGCGTGCA ATACAGATTT CTGCGCCATT GATTGGTATC AACAACCGTA ATCTGAGTAC CTTCAACGTG TCATTGGAGA CAACGTTGAC AATGAAAGGG TTGGTGCCGC GTGATCGTTT GCTCGTAAGT GAGAGCGGTA TCCTTACCTC TGCCGATGTA CAACGGCTGC GTGCTGCGGG TGTGAATGCG TTTCTTGTTG GTGAGGCGTT TATGCGTGCG GCTGAACCTG GTGAGTCACT CAGAGAGATG TTCTTCATCA CGTGA
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Protein sequence | MSNILTKILA RKVEEIAERL LHVSQAELVA RCADLPTPRG FAAALQATIV HGDPAVIAEI KKASPSKGVL REDFRPAEIA ISYELGGASC LSVLTDVHFF KGHDNYLSQA RDACTLPVLR KDFTIDPYQV YEARVLGADC ILLIVAALDD AQLVDLSGLA LQLGMDVLVE VHDIDELERA IQISAPLIGI NNRNLSTFNV SLETTLTMKG LVPRDRLLVS ESGILTSADV QRLRAAGVNA FLVGEAFMRA AEPGESLREM FFIT
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