Gene Xfasm12_0145 details

Gene Information

• Locus tag: Xfasm12_0145
• ID: 6121135
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 177502
• End bp: 179415
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641648233
• Product: hypothetical protein
• Protein accession: YP_001774812
• Protein GI: 170729379
• COG category: [S] Function unknown
• COG ID: [COG4805] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.549685
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTCTT TCCTCATTCG TTTGCTCACG CTATTTATTG TCACTACACT GAATTTATTT 
TTGTGTTTGC CAGCTCCAGC TAAAGCTGCT ACTCACAAGA GTAGCAAACT TCAAACCATG 
CAAACTCATA GTAAATCTAA GAACCAAATG TCTGTGTTAC TTGGTAAGGC AGAACAGCTA 
AACCTGCTAT ATGACAAGTA CTGGGATGAT TCAATGAGGC TCAATCCCCT ACAGGCTACA 
TTGCAAGGAG ATGCTTATCA TGGAGATAGA ATGCCCAATT TCCTGTCGGC TGAGTTCCGG 
AAGCAGCACC ACGATTTCAT CGAGAAATGG TTGAAGATGG TTGAGATGGT CGGGGCGGAT 
GGACTAGATG GACAGGCATT TATCAGCTAC CAGATCTTCG TGCGTGATGC ACGTAACTCG 
TTGCAAGCCG AGCGTTATCC GAACTGGATG TTGCCAATTA ATCAGTTTTA CAACATCGCT 
AATGTGGCAG TAGTTCTTGG CTCTGGTAAT GGTGCGCAAC CATTCAATAC CGTGCAGGAT 
TATGACAACT GGGCACATCG CTCACTAGGC ATTCCTGCGT TGTTCAATCA AGCCATTGTG 
AATATGCGTC TAGGTATGAA ATCTGGTGTA GTTCAGCCGA AAGTGTTAAT GGAAAAGGTG 
ATTCCGCAGT TGGATTCTAT TATCAAGCCA ACTGCGGAAG AAACGTTGTT CTGGGTGCCC 
ATCCGTAATA TGTCTGTCTC CTTTTCAAAG GAGAACCGGC AACGTATTAC TGCTGAATAT 
AAAAGTATTA TTGAGTATCG GTTGCTACCT GCTTACAGAG CACTACGTAA TTTTATTGCC 
ACTGAATATC TTCCAGTGTG TCGTGATAGT GTTGGCTTGA GTGCATTACC TGGTGGTGCG 
TCTTGGTATG CATATACAGT GCGTCAAAGC ACTACGACGA ACATGACCCC AGAACAGATT 
CATCAGCTTG GCTTGAAAGA AGTAGCGCGA TTACAGGCTG AAATTCAGTC AGTGATGCGT 
CAGCTCAATT TCAATGGTTC TATGCAGAAG TTCTTCAGTT TCATGCAGAA TAATGAGTAT 
TTTACCTTTG GTAGTGAGAA AGAGATGCTT GCTTATTACC GTGATCTCAG AACACGTGTG 
GAGGCACGGG TGCCAGCTTT ATTTTCGCTC GTGCCAAAAG CTGGTTTTGA AATTCTTCCG 
GTAGAAGCAT TCCGTGCACC TTCAGCAGCA GCTGGTTCGT ATATGCCACC GTCTAGTAAT 
AGACGCCATA ACGGTGTGTT CTACGCTAAT ACTAATGATT TGTCTTCCCG TCGTACTTGG 
AATGCAGAAA AGCTTTTTCT GCATCAAGGA ATTCCTGGAT ATCATTTTCA GTTAGGATTG 
CAACAGGAAT TGCGTAATCT CCCTAAGTTC CGTCGATTAG GTGGTGAGAC TGCATTCATT 
GAAGGATGGG GTTTATATGC TGAATCTCTT GGTAAGGAAC TCGGACTTTA CCAAGATGCA 
TACAACTATT TCGGTTACTT GCAAGATGCG CTATCGAGGG CAATTCGTTT AGTAGTCGAC 
ACCGGTTTAC ATACTAAAGG CTGGACTCGT GCACAAGTAG TTGACTATAT TGTAGAGAAT 
TCGGCAACCA GTCCTATAGA GGCTGAAGCC GAAGTTGATC GTTATATCGC TATCCCAGGT 
CAAGCATTAG CCTATAAGGT TGGCGAATTA AAAATCCACC AATTGCGCCA GTATGCACAA 
CTGGCATTAG GTCCAATGTT CGATCTACGG GAGTTCCATG CGGAAATACT GAAAGATGGT 
TCAGTACCGC TGGACATTCT GCAACAAAAA ATCGAACGCT GGATTGCTGT AAAACGTGTC 
AATATGCCAT CAATATCACA TCAAAAGTCA CGGGATCAGC GCCGTAAATC GTAG 

 

Protein sequence

MSSFLIRLLT LFIVTTLNLF LCLPAPAKAA THKSSKLQTM QTHSKSKNQM SVLLGKAEQL 
NLLYDKYWDD SMRLNPLQAT LQGDAYHGDR MPNFLSAEFR KQHHDFIEKW LKMVEMVGAD 
GLDGQAFISY QIFVRDARNS LQAERYPNWM LPINQFYNIA NVAVVLGSGN GAQPFNTVQD 
YDNWAHRSLG IPALFNQAIV NMRLGMKSGV VQPKVLMEKV IPQLDSIIKP TAEETLFWVP 
IRNMSVSFSK ENRQRITAEY KSIIEYRLLP AYRALRNFIA TEYLPVCRDS VGLSALPGGA 
SWYAYTVRQS TTTNMTPEQI HQLGLKEVAR LQAEIQSVMR QLNFNGSMQK FFSFMQNNEY 
FTFGSEKEML AYYRDLRTRV EARVPALFSL VPKAGFEILP VEAFRAPSAA AGSYMPPSSN 
RRHNGVFYAN TNDLSSRRTW NAEKLFLHQG IPGYHFQLGL QQELRNLPKF RRLGGETAFI 
EGWGLYAESL GKELGLYQDA YNYFGYLQDA LSRAIRLVVD TGLHTKGWTR AQVVDYIVEN 
SATSPIEAEA EVDRYIAIPG QALAYKVGEL KIHQLRQYAQ LALGPMFDLR EFHAEILKDG 
SVPLDILQQK IERWIAVKRV NMPSISHQKS RDQRRKS