| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0095 |
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| Symbol | |
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| ID | 6119805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 109814 |
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| End bp | 110947 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641648180 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001774765 |
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| Protein GI | 170729332 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG TGTTTGACCT GACCTGTGAT CTGATCTCCA GGCCTTCCGT GACACCAGAA
GATGCCGGCT GCCAAGCCAT GATTGCAGCG CGTCTAGAGC GTGTCGGCTT CACCTGTGAA
CACCTGCATT ACGGTTCCGT CGCCAACCTA TGGGCCACAC ATGGGCAGGG TGCGCCGGTG
CTAGTGCTAC TGGGTCACAC GGATGTGGTC CCTCCCGGTC CAATTGAAGC GTGGACTTCG
AACCCGTTTA TCCCACAGCG ACGCGAAGGC AAGCTCTACG GACGTGGCGC TGCGGATATG
AAAGGCAGTG TGGCTGCATT CGTGATTGCT GCCGAGCGCT TCTTAGTCGC CCATCCTGGG
CATCCCGGAA CCTTGGCGAT CTTACTGACC TCTGATGAAG AGGGCCAAGC AATAGATGGT
GTCCGTAAAG TGGCCGAGAC GTTACGCCAG CGTGGTCAGC GTATCGATTG GTGCTTGACT
GGCGAACCGT CTTCGAGCGA GCGACTGGGT GATCTGCTGC GGGTTGGCCG CCGTGGCAGT
CTGTCGGCAA CGCTTCACGT GAAGGGCGTC CAGGGACATG TTGCCTATCC CCATCAAGCA
CGCAACCCCA TTCACCTCGC CGTACCTGCG CTCGCTGCAT TGACGGGGCG GCATTGGGAT
GATGGTGATG AATCCTTCCC GTCAACCAGC TTGCAGATCA GCAATATCCA CGCTGGAACC
GGCGCCAACA ACGTGATTCC TGGTGCACTG GAGGTTGCCT TCAATCTGCG TTACAACCCG
CATTGGAGCG CCCCGCGCTT GGAGAGTGAG ATCGTCGCAT TACTCGATCA ACACGGGCTG
GACTATACCT TGCACTGGCA TCGTAGCGGT GAGCCGTTCT ATACCCCGGA AGGAAAATTA
CGTCGCATCG CACGTGAAGT ATTAGAGCGT TTTTCCGGCG CGCCTCCGGA AGAAAGCACG
GGTGGTGGCA CGTCCGATGC GCGTTTTATT GCGCCACTGG GCGCGCAATG TATTGAGGTT
GGACCGGTCA ACGCCAGCAT TCACCAGGTT GATGAGCATG TGTGCCTGGC CGACTTGGAG
GCCCTGCCAG ACCTGTACCA GTTGCTAATT GAGCGGTTGC TTGCTGAACA TTGA
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| Protein sequence | MSEVFDLTCD LISRPSVTPE DAGCQAMIAA RLERVGFTCE HLHYGSVANL WATHGQGAPV
LVLLGHTDVV PPGPIEAWTS NPFIPQRREG KLYGRGAADM KGSVAAFVIA AERFLVAHPG
HPGTLAILLT SDEEGQAIDG VRKVAETLRQ RGQRIDWCLT GEPSSSERLG DLLRVGRRGS
LSATLHVKGV QGHVAYPHQA RNPIHLAVPA LAALTGRHWD DGDESFPSTS LQISNIHAGT
GANNVIPGAL EVAFNLRYNP HWSAPRLESE IVALLDQHGL DYTLHWHRSG EPFYTPEGKL
RRIAREVLER FSGAPPEEST GGGTSDARFI APLGAQCIEV GPVNASIHQV DEHVCLADLE
ALPDLYQLLI ERLLAEH
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