Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0089 |
Symbol | trmD |
ID | 6119799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 105119 |
End bp | 105985 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641648174 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_001774759 |
Protein GI | 170729326 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGGC CAGTTCTGTC CCGTCTTGCC GGATACTGCT TCACCACAGC ATCCCTCATC CAATCCGGTT TCAGATATCC CGCTTGCATG CGTATTGACG TTATCAGCTT GTTCCCCGAG TTCATTACAC AGTGTGTCGG GTTTGGCGTG ATCGGTAGAG CACAGGAACG TGGTTTGCTT GATTTACACA ACTGGAATCC ACGCGACTAT GCTCAAGGAA ATTACCGGCG TGTCGATGAT CGTCCGTTCG GTGGTGGTCC AGGGATGGTG ATGTTGATCG AGCCACTGCG TGCCTGCCTT GAAGCAGTAC GGGCAGCAGA TCCTCAACCA GCGCCCTTGA TTTATCTCAG TCCGCAAGGT GTCCTGCTGA ACCAGTCCCG CGCGAGGAAG CTGGCGATGC TGCCGCGCAT GATATTGCTA TGCGGCCGAT ACGAAGGGAT TGACGAGCGT TTTATCGCCC ATGAAGTAAA CATGGAGTTG TCAATTGGCG ACTATGTGTT GTCTGGCGGT GAATTGGGAG CGGCTGTGGT TGTCGACGCA GTCACCCGGT TACAGGAGGG GGTATTGAAC GACGCTGAGT CAGCGAAGCA GGACAGCTTC GAAGCAGCCG ATAGCCTGCT TGATTATCCC CACTACACTC ATCCATCCAA TCATGCTTTT GGGAATGTTC CCGAAGTATT ACGCTCAGGT AACCATGTTG CGATCACGCG TTGGCGTCGC CAGCAGTCGC TGCTGCGCAC TTGGTTGCGG CGACCAGACC TAATAGATGA AGCGAGACTG TCGAAAGCTG ATCGCTTACT GCTTGATGAG ATTAAGCGCA CACATCCTAT GGATACGGAT CAAAAAGCGT CAGTCTCTTG GCGTTGA
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Protein sequence | MIRPVLSRLA GYCFTTASLI QSGFRYPACM RIDVISLFPE FITQCVGFGV IGRAQERGLL DLHNWNPRDY AQGNYRRVDD RPFGGGPGMV MLIEPLRACL EAVRAADPQP APLIYLSPQG VLLNQSRARK LAMLPRMILL CGRYEGIDER FIAHEVNMEL SIGDYVLSGG ELGAAVVVDA VTRLQEGVLN DAESAKQDSF EAADSLLDYP HYTHPSNHAF GNVPEVLRSG NHVAITRWRR QQSLLRTWLR RPDLIDEARL SKADRLLLDE IKRTHPMDTD QKASVSWR
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