| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0079 |
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| Symbol | |
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| ID | 6119789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 94358 |
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| End bp | 96190 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641648165 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001774750 |
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| Protein GI | 170729317 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGT ACCGATCCAA GACTTCCACC TACGGCCGCA ATATGGCTGG TGCGCGTGCG
TTATGGCGCG CTACCGGCAT GAAGGATGAC GACTTCCAGA AGCCGATCAT CGCGATTGCT
AATTCTTTCA CTCAATTCGT CCCAGGACAC GTTCATCTAA AGGATCTTGG CCAGCTAGTC
GCACGTGAAA TTGAGCGTCT AGGTGGTGTA GCCAAAGAAT TCAACACGAT TGCGGTAGAT
GACGGTATCG CGATGGGGCA CGACGGAATG CTGTATTCGC TACCTAGTCG TGAAATCATC
GCCGACTCCG TCGAATACAT GGCAAACGCG CATTGTGCTG ATGCGCTGGT ATGCATCTCC
AACTGCGACA AAATCACTCC TGGCATGCTG ATGGCATCAC TCCGCCTGAA CATCCCAACG
GTGTTCGTCT CAGGTGGACC GATGGAAGCC GGAAAAACGA CACTGGCTGA TCACAAACTC
GACCTAGTTG ACGCAATGGT GCTGGCTGCC GACCCTCACG CGAGTGACGA GGAAGTTGCT
ACCGTGGAAC GCAGTGCCTG CCCCACTTGC GGTTCATGTT CGGGCATGTT TACTGCCAAC
TCGATGAACT GTCTCACCGA AGCACTCGGT TTATCCTTGC CAGGTAACGG GACTGTCGTT
GCGACGCATT CTGACCGTAA ACAACTGTTT TTGAACGCGG GACGCACTGT CATTGAGTTA
TGTCACCGCT GGTATGGGGC TGAAGATGCC ACCGCATTAC CTCGAGGCAT TGCTACATTT
GCTGCGTTCG AAAACGCGAT AACCCTAGAT ATCGCGATGG GCGGCTCGAC TAATACGATT
TTGCACCTAC TTGCAGCCGC ACAGGAGGCG CAAGTGTCTT TTACGATGCA AGACATTGAT
CGCTTGTCAC GGAATGTGCC GCAATTATGC AAAGTTGCTC CCAACACGCA AAAGTACCAT
ATTGAGGATG TGCACCGCGC TGGAGGCATC TTCGGGATTC TAGCTGAATT GGCACGGGGA
AACTTGTTAC ATACCGACGT CGCAACCGTA CATAGCAAAA CCCTGGGTGA GGCCATCGCC
ACATGGGACA TTATCGGGAC GCAGGATGAA GCGGTCCATA CGTTTTATAA AGCAGGTTCA
GCAGGCATCC CAACCCAGGT GGCCTTCAGT CAAAGTACGC GTTGGCCGTC ACTCGATACT
GATCGTACCG AAGGCTGCAT CCGTGACATG GAACATGCGT TCTCGAAGGA AGGAGGCTTG
GCAGTGCTCT ATGGCAACAT TGCCCAGGAT GGCTGCGTCG TAAAGACCGC CGGTGTAGAC
GCATCGATCC ATGTGTTCGA AGGTTCGGCC CTGGTGTACG AAAGCCAGGA GGCAGCGGTC
AAAGGAATCC TTAGCGACGA GGTACAACCA GGCATGATCG TCGTGATTCG CTACGAAGGC
CCCAAGGGCG GCCCTGGCAT GCAGGAGATG CTGTATCCAA CGTCGTATTT GAAGTCCAAA
GGTCTCGGGA AGCAATGTGC TCTATTCACC GATGGCCGGT TTTCTGGCGG GACCTCAGGT
TTATCGATTG GCCACGCTTC ACCCGAGGCC GCAGCAGGTG GTGCTATTGG CCTCATCCGC
GATGGCGACC GTATCCGCAT CGACATTCCA CAGCGCGCGA TCAATGTGCT CATCAGCGAA
GAGGAGTTGG CTTCACGGCG CCTCGAACAA CATGCCATCG GCTGGAAGCC GGCCCAGTCA
CGGACGCGTA AGGTCAGCAG TGCGCTGAAG GCGTATTCAT TACTTGCAAC CAGCGCCGAC
AAGGGGGCCG TACGCAACAA AACGCTACTT TGA
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| Protein sequence | MPEYRSKTST YGRNMAGARA LWRATGMKDD DFQKPIIAIA NSFTQFVPGH VHLKDLGQLV
AREIERLGGV AKEFNTIAVD DGIAMGHDGM LYSLPSREII ADSVEYMANA HCADALVCIS
NCDKITPGML MASLRLNIPT VFVSGGPMEA GKTTLADHKL DLVDAMVLAA DPHASDEEVA
TVERSACPTC GSCSGMFTAN SMNCLTEALG LSLPGNGTVV ATHSDRKQLF LNAGRTVIEL
CHRWYGAEDA TALPRGIATF AAFENAITLD IAMGGSTNTI LHLLAAAQEA QVSFTMQDID
RLSRNVPQLC KVAPNTQKYH IEDVHRAGGI FGILAELARG NLLHTDVATV HSKTLGEAIA
TWDIIGTQDE AVHTFYKAGS AGIPTQVAFS QSTRWPSLDT DRTEGCIRDM EHAFSKEGGL
AVLYGNIAQD GCVVKTAGVD ASIHVFEGSA LVYESQEAAV KGILSDEVQP GMIVVIRYEG
PKGGPGMQEM LYPTSYLKSK GLGKQCALFT DGRFSGGTSG LSIGHASPEA AAGGAIGLIR
DGDRIRIDIP QRAINVLISE EELASRRLEQ HAIGWKPAQS RTRKVSSALK AYSLLATSAD
KGAVRNKTLL
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