Gene Xfasm12_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0065 
Symbol 
ID6119775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp82369 
End bp82923 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content53% 
IMG OID641648153 
Productfimbrial subunit precursor 
Protein accessionYP_001774738 
Protein GI170729305 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0704887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA TGAAAAATTT TGCACTCTCA AGCATCGCAT CCGCCGCTAT ACTGTTCTGC 
GGCGCAGCTT TGGCAGCTGA TGGCACCATC ACTGTCAACG GTAGGGTGAC CGACAGAACC
TGCACCATCA ATGGCGGAAC CCCGAATTTC TCGGTTACAT TGCCGACAGT ATCCTTCGGT
TCTCTGAAAG CCCCAGGTAA CACTGCAGCT CGTACGCCAT TCACCATTGA ACTGACAAAT
TGCACGGCGG GCAGCACCGT AGCCACCTAT TTTGAGCCAG GCCCAGCGGT GGATATCAAT
ACTTCCAGAC TAATCAATCA AGCCCCGACA GCCAGTGCGG CAACCAATGT ACAGGTCCAA
TTGCTGGGCA GCAACGGTTC GGTCATCCCC ATCAAGGCCC TTGGTACTAC CGGTGCTCAG
GACAACTCAC AATGGGTAGC GGTCAACGCA TCTGGCGCAG CCAGTATGCA TTACTACACC
GAGTATTACG CCACCGGCGT CAGCACAGCC GGTAACGTGG TAACCAACAT TCAGTACACC
ATCATCTACC AATAA
 
Protein sequence
MKIMKNFALS SIASAAILFC GAALAADGTI TVNGRVTDRT CTINGGTPNF SVTLPTVSFG 
SLKAPGNTAA RTPFTIELTN CTAGSTVATY FEPGPAVDIN TSRLINQAPT ASAATNVQVQ
LLGSNGSVIP IKALGTTGAQ DNSQWVAVNA SGAASMHYYT EYYATGVSTA GNVVTNIQYT
IIYQ