Gene Xfasm12_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0038 
Symbol 
ID6121516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp39023 
End bp39562 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content54% 
IMG OID641648125 
Producthypothetical protein 
Protein accessionYP_001774716 
Protein GI170729283 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTCC GCAATCGTAT GCCGCCTTGG CATGAGAACT TTAAGTTGCC GAATGGTCAT 
GTGTTGCTGT TGCGTCCTGT CCGCCCTGAA GATGTCGAAC CTTTGCAGGG TGTATTTGCG
TTGATGGGGC CCCAAGAAAT CCGTGAGAGG TTTGCACCGT CTGCGACCGG TTCAAGTGAA
CGCTTCCAAC AACTGACCAA TCCCAATGCT AAGCGTGAGA TCGTGCTGGT CGCAGCCGAG
CAGCTGCCAC CGGGAGAGGC CATGATTGCC GCGCTGGCGC GTGCCGCAAT CGTGCCCAAT
TCGCGTCATG CTGAGTACAT TATTTTGGTC AGCAGTTTCG TGAGTGGCCA GGGGTTGGGG
CGACAGTTGC TACGTAAATT GGTGAAGTGG GCGCGTGGCA AGTATCTCGA TCATCTCTAT
GGCGACATAT TGGAGCGCAA CAGGCCAATG TTGGAATTGG CCGAGTCATT GGGTTTCCAA
CGTGAGTCTC ATCCGGAGTC CCCAGATTTG GTGCGTATGA CATTGAAACT GTATGGTTGA
 
Protein sequence
MSVRNRMPPW HENFKLPNGH VLLLRPVRPE DVEPLQGVFA LMGPQEIRER FAPSATGSSE 
RFQQLTNPNA KREIVLVAAE QLPPGEAMIA ALARAAIVPN SRHAEYIILV SSFVSGQGLG
RQLLRKLVKW ARGKYLDHLY GDILERNRPM LELAESLGFQ RESHPESPDL VRMTLKLYG