| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0033 |
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| Symbol | mscL |
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| ID | 6121511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 34733 |
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| End bp | 35137 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641648120 |
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| Product | large-conductance mechanosensitive channel |
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| Protein accession | YP_001774711 |
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| Protein GI | 170729278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGTTTTA TCCGCGAATT TAAAGAATTT GTAATGCGTG GCAACGTCAT TGACCTCGCC
GTAGCGGTGG TGATTGGTGC AGCATTCGGA AAAATCGTTA CCGCACTGGT TGATAAAATT
ATTTCACCAC TCATCGGTGT GATGGTCGGA GGGATCGACT TCTCCAAGCT CTCCCTCACC
TTGAAAGCTG CGACAGTGGA TACAGCAGGG AAGGAGGTGC CAGCCGTCGT GATTGGCTAC
GGTGACTTCC TCAACACGAT CCTACAATTC ATCATCATTG CTTTCGCAAT TTTCATCATC
GTCAAAATGA TTAATAAGGT GACTAACAAG CAACCCTTAC CACCAGAAAC ACCTAGCGAA
GACGTGCTAC TACTACGCGA GATTCGCGAT TCGCTGAAAA AATAA
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| Protein sequence | MSFIREFKEF VMRGNVIDLA VAVVIGAAFG KIVTALVDKI ISPLIGVMVG GIDFSKLSLT
LKAATVDTAG KEVPAVVIGY GDFLNTILQF IIIAFAIFII VKMINKVTNK QPLPPETPSE
DVLLLREIRD SLKK
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