Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0029 |
Symbol | |
ID | 6121507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 30789 |
End bp | 31523 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641648116 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001774707 |
Protein GI | 170729274 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATC ACACGCCGTT ATTACTGGGG ATCCGCGAGC GGTTGATCTT CGCACTAGAC GTACCCAGTC GAACGCAAGC ATTGGAATGG ATCGACCAAT TGGGCGATGC CATCTCCTTC TATAAGATCG GCATGGAATT GTTGGCTTCC GGCGAATATT TCCAGGTACT CGACGACTTG GCTTCGCGTG GCAAACGTGT CTTCGTGGAC CTAAAATTCT TCGACATCCC CGCTACAGTC GCAGGAGTCA TCCGTCGTCT TTCGCAGTGG CCCATCAGCT ATTGCACAAT CCATGGCTGG CACGCGCCCA TGATGCAAGC GGCGACCGAA GCCAATACCA GCAACATGCA TTTACTGGCA GTCACCGTGC TGACATCAAT GACACGTGAA GATTTAGCGA AGATGGGTAT CAACCGCGAA CCCGTTGATG TCGTAGTTGA ACGTGCATTA GCCGCCCACA TGGCGGGGAT GAGCGGTGTG ATTGCTTCTG GACAGGAAGC GGCAGCAATC CGCCGCGCCG TCGGCTCTGG ATTCTCAATC GTTTGTCCAG GCATTCGCAC AAACCATGTG CCTCACAATG ACCAACAACG CACGATAGGC ATCAAGGCTG CTTTTGCCAA CGGTGCAGAT GCGATTGTGG TGGGGCGCCC AATCCGAATG GCGCAGGATC CGCAAGCGGC AGCAGAGGCT ATGCAAACAG AAATCATGAC GGCACTCACT GAGCCATCAA CATAA
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Protein sequence | MMNHTPLLLG IRERLIFALD VPSRTQALEW IDQLGDAISF YKIGMELLAS GEYFQVLDDL ASRGKRVFVD LKFFDIPATV AGVIRRLSQW PISYCTIHGW HAPMMQAATE ANTSNMHLLA VTVLTSMTRE DLAKMGINRE PVDVVVERAL AAHMAGMSGV IASGQEAAAI RRAVGSGFSI VCPGIRTNHV PHNDQQRTIG IKAAFANGAD AIVVGRPIRM AQDPQAAAEA MQTEIMTALT EPST
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