| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0027 |
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| Symbol | |
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| ID | 6120888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 26281 |
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| End bp | 29928 |
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| Gene Length | 3648 bp |
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| Protein Length | 1215 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641648114 |
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| Product | PilY1-like protein |
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| Protein accession | YP_001774705 |
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| Protein GI | 170729272 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CAGTGTTTAA TGCGGCCTTG AATCGGGTGG CTGCGATATT GATCGGCACA
CTCGTAGGTA TCAGCGGTGC GGTACATGCG AGTGTGGATA TCTCTTCGTC CCCATTGCAT
GGCGGAAAGG ATGTGCCTGG TAACCTTGCC ATTCTTGCGT CTGTCGAATT TCCCACGTTG
ATCAGCGTGG CTAATCTGGC CGACACCTAC ACACCAGGGG TGAGGTATGT TGGCTACTTC
GATTCCAACA AGTGCTACAA ATACCACTAC AGTTCTCAGG AAAGTGATCG TTACTTCTAT
CCCGTTGCTT CTCCAAGGCC TCAAGCCAAT TACGGTTGTA ATACCACAGG CGGGGTGTGG
GCTGGGAATT TTCTGAATTG GGCCGCCACC CAGACGATTG ATCCATTTCG CTCCGCATTG
ACTGGTGGCT ATCGTGTGCG CGACACCGTC AGCGAGACCA TCTTGGAAAA AGCAGTGATG
GATCGTGATT CTCAGGAAAA TTTCCCGCGT CGTAATGTCG CAGGCCGCAA TGTGCTGGCT
ACTTTATTGC CTACGCAGTG GAACAACTTC CGTATCCGTA TTGATGGTCT CGGCAACAGG
ATGCGGTTTA CTCAGTTTTC CAGTTTATGG ACAGATCCTT TAAACACAGA GGGCCAACCT
TACGATTCTT CCAGGCATCC ATTAAACAGC AATGATAGAG GCGTTTATGA AGTGAGCGTC
CGAGTCAAAG TGTGTGATCC ATCTGCGGGC CTGGAGTCTA ATTGTGTCGC CTATCCCAGA
GGCTCCTACA AACCCGAGGG GCTGATCCAG GAATATTCCA AGCGCATTCG GTACAGCGTC
TTTGGCTATA AAAATGATCA CAGCTACTTG ATTGATGGTG GTGTCCTGCG TGCCCGCCAG
AAGTTTGTTG GACCCCAAAC CCACTATCCG GAGCAAGGGA AGAAAACCAA TCCCCATGCC
GAATGGGATC CGCAAACCGG CATCCTCTAT GACAACCCTG ATCCTGAGGA TGCTGCGGCG
ACCACCCGGC GTGTGGGCCG TACCATTGCT AATTCCGGCG TCATCAACTA TTTGAACAAG
TCCGGTCAAA TGGACACGGG TAGGATTTCA AAGATTTACG ATCCTGTCAG TGAGCTTTAC
TACACGGCAT ACCGTTATTT TAAACGCCTG GGCAATGTCC CGGAATATTC GGTATTGACG
GGTTCTGTGA ATGAAAAGTA CCAGCAGAGC GATGCGTTTC CGGTGATTAC CGATTGGGAT
GACCCGATTC GTTATGCCTG CCAGAGCAAT GTTGTGTTGG GTATTGGAGA TACCCACACC
AATCAGGATA AGAATCTGCC TGGGAATACC AACACAATGG AAGAGCCTTC CAAACCCCAA
GCGGTCAGAA ATGACAGAAG CATTGACGTG GTCAAGCGCA TGGCGCAGAT CTTCCAGATG
GAAGGCATGA GACAGCAGGA TGCTATGACG TCGGCTGTGG CACCTAAATT CAATTTTCAC
AGATACAACT CAGCCTACAT TGCCGCTTTG GCCTACGATG CCCATACCAA GGACATGCGT
CCTGATCTTG AAGGGGATCA GCTGTTCACG ACACATTGGG TGGATGTGGT GGAAGCGGGA
GATTACAAAA AACCAGTATC AACCAACCAA TACTGGTTGG CCGCGAAATA TGGCGGATTT
CAAGTGCCTG CCGGTTACGA TCCGGATAAG ACAGTTAACC CCCTGTCTGA GGCGACTTGG
TGGACCAACG GCGAGTACGT CAATGGCGAT CCTAATGCCA AGCGGGCGGA CAATTTCTAC
GTTGCCGCCG ACGCGGAAAA GATGGTAGCC AGCCTCAAAC AGGCCTTCTC GCGCATCGTT
GCCGAGATCA AGGGGGCAGG GACGGGACTG TCTAGCAACA GCGCTAGACT TGAAACCGGT
GCGGTTACCT ACCAGGCACA ATTTTTCAGT GGCACCTGGC GTGGTGATCT GATCGCCTAT
CACGTAGATA AAGTGACCGG CGCGCTCACC CCATTTTGGA ACGCCAACTT CCCGGCATGG
GAACAGCGTG TTATCAAGTT TGCCAATGCC ACCACACTGC AAGACTTCAC CAAAAAAAAT
CTAGGCCAAA CCGCGCTGGC ATCGGCGAGT GCGCAGCAGA TTAATTACCT GCGTGGTGAT
CGCAGCCAGG AAGGCAATGT GCCCGGCAAA CTCCGCATCC GCAGCGGCAT CATGGGAGAT
ATTGTCAACT CCCAACCGCT CTATGTTGGT GCCCCCAATG GACGGCTGTA CACAACCGCG
AACTTCACTG GGGCGAGCGC CTATGCCGCG TTCGCCGCCC AGCAGGCCAA CCGGGTGCCG
GTGGTTTACG TGGGTGCCAA TGACGGCATG TTGCATGCCT TCGATGCCAA TACCGGTAAA
GAAATATTTG CATTTGTGCC TCGTGCGGCC ATGCCCAAAT TGCTGGAGTA CACCGATCAG
AACTACGTAC ACCAGTACTA CGTGGATGGT GAACTGACCG CCGCTGATAT TTACGATACC
AAGTTGGGGT GGCGCTCGGT GCTGGTGGGG ACGTTGGGTC GAGGCGGCAA AGGTCTGTTT
GCCTTGGATG TGACCGACCC TTCCAATATT CGTTTGCTGT GGGACAAAAC GTCCGCGGAT
ATTGGCGGCT TGGGGAATAC CTTGAGCAAA CCGATGATTG TGCAGACCTC CGATGGCACC
TGGTCGGTAT TGCTTGGCAA TGGTCCAAAC AGCACTGCGG ATAACGCGCA ACTGATCGTG
ATGAATCTGT TGACCGGTCA TGCAGCCCAA GTGCCCGTTA GCAAGACCTC AAACAATGGA
CTGTCTGGTG TATTTCCCTG GTCCAGCCAG AGCAACGGCA TTACGGATCG CGTGTATGCA
GGTGACCTGC TGGGCACGTT GTGGCGCTTT ACTTTTAGCG ATAACGCTTG GAAGGTGGTG
CCGCTGTTTA CTGCCACGTA TCAAGGGAAG GCACAGCCGA TCAGCGCAAC TCCGCTGGGG
GCCATTGAGC GCTCCACGGG GCGGATGTGG ATTTTCTTTG GGACAGGGAG AGTGTTGTCT
TCGCATGATA TGGATAACAA GGAGGTACAG AGCTGGTATG GCCTGATTGA CCAGGGAACG
ACGATTTCTG GGCGTACTGG GCTGAGCCAG GTACAGATTG TTGATGAGGG TGTAGTCAAT
GGGTATGCCG TGCGTACGGT TTCTGATCCT AAGAATATAG GTACTGATGG CTGGTATATG
GATCTGATTT CGCCGAAATC CGGTAAGCAG GGAGAACGGA TGATTGTGTC CAACATGTTC
CGTGGAGCGG CGTTGATCGG GACCACTCGT ATTCCGGATA ACAGCGACAT TTGCAAGCTC
AGCGGCAGTG GGTTTGTCAT GGCGATCAAC CCATTCACTG GTGGCCGGTT GGGTCAATGG
TTTTTTGATC TCAACACTGG TGGTGGCAGT GGTGGTAGTG GTGGTGCGTT GAATGGTAAT
CCAGTGTCTG GTGTGGGTGT GAGCAGTGCG CCGAATAGCC CTGTATTTAC CGGCAATATC
ATGCAAATAG GAGCGGATGA CGGTACGGTT ACGTCGTTGA AGACGCCCTC CAGCGGAGGC
CTCAATATAA ACCGTGTGTC ATGGCGTGAA ATCTTGAGGA CTGAGTAA
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| Protein sequence | MKKTVFNAAL NRVAAILIGT LVGISGAVHA SVDISSSPLH GGKDVPGNLA ILASVEFPTL
ISVANLADTY TPGVRYVGYF DSNKCYKYHY SSQESDRYFY PVASPRPQAN YGCNTTGGVW
AGNFLNWAAT QTIDPFRSAL TGGYRVRDTV SETILEKAVM DRDSQENFPR RNVAGRNVLA
TLLPTQWNNF RIRIDGLGNR MRFTQFSSLW TDPLNTEGQP YDSSRHPLNS NDRGVYEVSV
RVKVCDPSAG LESNCVAYPR GSYKPEGLIQ EYSKRIRYSV FGYKNDHSYL IDGGVLRARQ
KFVGPQTHYP EQGKKTNPHA EWDPQTGILY DNPDPEDAAA TTRRVGRTIA NSGVINYLNK
SGQMDTGRIS KIYDPVSELY YTAYRYFKRL GNVPEYSVLT GSVNEKYQQS DAFPVITDWD
DPIRYACQSN VVLGIGDTHT NQDKNLPGNT NTMEEPSKPQ AVRNDRSIDV VKRMAQIFQM
EGMRQQDAMT SAVAPKFNFH RYNSAYIAAL AYDAHTKDMR PDLEGDQLFT THWVDVVEAG
DYKKPVSTNQ YWLAAKYGGF QVPAGYDPDK TVNPLSEATW WTNGEYVNGD PNAKRADNFY
VAADAEKMVA SLKQAFSRIV AEIKGAGTGL SSNSARLETG AVTYQAQFFS GTWRGDLIAY
HVDKVTGALT PFWNANFPAW EQRVIKFANA TTLQDFTKKN LGQTALASAS AQQINYLRGD
RSQEGNVPGK LRIRSGIMGD IVNSQPLYVG APNGRLYTTA NFTGASAYAA FAAQQANRVP
VVYVGANDGM LHAFDANTGK EIFAFVPRAA MPKLLEYTDQ NYVHQYYVDG ELTAADIYDT
KLGWRSVLVG TLGRGGKGLF ALDVTDPSNI RLLWDKTSAD IGGLGNTLSK PMIVQTSDGT
WSVLLGNGPN STADNAQLIV MNLLTGHAAQ VPVSKTSNNG LSGVFPWSSQ SNGITDRVYA
GDLLGTLWRF TFSDNAWKVV PLFTATYQGK AQPISATPLG AIERSTGRMW IFFGTGRVLS
SHDMDNKEVQ SWYGLIDQGT TISGRTGLSQ VQIVDEGVVN GYAVRTVSDP KNIGTDGWYM
DLISPKSGKQ GERMIVSNMF RGAALIGTTR IPDNSDICKL SGSGFVMAIN PFTGGRLGQW
FFDLNTGGGS GGSGGALNGN PVSGVGVSSA PNSPVFTGNI MQIGADDGTV TSLKTPSSGG
LNINRVSWRE ILRTE
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