| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0024 |
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| Symbol | |
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| ID | 6120885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 24247 |
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| End bp | 24726 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641648111 |
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| Product | pre-pilin leader sequence |
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| Protein accession | YP_001774702 |
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| Protein GI | 170729269 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATCG CAAGCAAAAA AGCCGTTGCC GGCGTTAGTT TGATCGAAGT GCTGATTTCG
GTATTTATTC TCGCCGTTGG CATGCTAGGC GTTGCGGCAA TGCAAGTCAT GGCGTTACGC
AACAATGATA GTGCCCTGCA GCGTAGCCAT GCAGTGATTC AGTCGTACGC GATTCTTGAA
GCGATGCGTG CCAATCGCAG CGAAGCGATC AAAGGCAGCT ACAACACCAA TGGAATGATT
TGTACCGCAC CGCAAGCGAA CAACCTGGTC GATGTTGATC GTCGTGATTG GATAAGCAAC
CTTAAGGCGG CATTGGGTGA TTCTGAACAC ACCTGTGGCT CGATCTTTTG TGATGACGCT
AATACATGCA CGATCCAGGT GCAATGGGAC GAGACTCGTG CGAGTGATAA AAGGTCCCCA
GCCGGTCAGC TTGTCTCTTC CACGCAGACT CAAGTCTTTG AAGTGAGCAG TAAACTGTGA
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| Protein sequence | MSIASKKAVA GVSLIEVLIS VFILAVGMLG VAAMQVMALR NNDSALQRSH AVIQSYAILE
AMRANRSEAI KGSYNTNGMI CTAPQANNLV DVDRRDWISN LKAALGDSEH TCGSIFCDDA
NTCTIQVQWD ETRASDKRSP AGQLVSSTQT QVFEVSSKL
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