Gene Xfasm12_0016 details

Gene Information

• Locus tag: Xfasm12_0016
• ID: 6120023
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 16169
• End bp: 16711
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641648106
• Product: hypothetical protein
• Protein accession: YP_001774698
• Protein GI: 170729265

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTACCC CTTCTTCCGC TCGTACCTTC GTGAAAGTCA TCGCTTTCAT TTCCCTTTGT 
TTAGGTGCAT TGAGCGTGTT GACGAGTCTG CTGTCGATCG TTCGCCTTGA ATTGTTTCCT 
GACCAAGAGC GTGGAACGTT GCAGGGCCTA TTGGGTGTTC CTATCCCGCC CCGGCTTTCT 
TGGGTGTTGA GCGATACCCG GGAACTCTCC TTGACCAATG GGGCGCTGTC ATTACTGTTT 
ATCTGCGTCG GTTGCGGACT GCTGTATCAG CGTGAATGGG CGCGACGTGG AATCATGGTG 
CTGCTGCTGA TCGTGACCCT TGTTAACTTC TCTGTTTTAC CTTTGATGGG AGTTCTATTC 
GATACTGTGA TGATCTTGCT AACACCGGAG ATGATCGTCG CACCAGAAAC CACCACACTG 
CTGCATCAGG CCCGGTGGAC GTTCCTTGGC GTTGGTGTCG TTATCGCAAT GGCCGTGGCG 
GTATTGAATG GCTGGATGAT TTGGCGCTTT CGGGTGCCGG AGATACGCGC TCAGTTCCAT 
TGA 

 

Protein sequence

MSTPSSARTF VKVIAFISLC LGALSVLTSL LSIVRLELFP DQERGTLQGL LGVPIPPRLS 
WVLSDTRELS LTNGALSLLF ICVGCGLLYQ REWARRGIMV LLLIVTLVNF SVLPLMGVLF 
DTVMILLTPE MIVAPETTTL LHQARWTFLG VGVVIAMAVA VLNGWMIWRF RVPEIRAQFH