| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0010 |
|---|
| Symbol | |
|---|
| ID | 6120017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 11350 |
|---|
| End bp | 12114 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641648101 |
|---|
| Product | biopolymer transport ExbB protein |
|---|
| Protein accession | YP_001774693 |
|---|
| Protein GI | 170729260 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAGG ATCTTTTCAT CGTTGCCACA GCAGGGGGTT CCAATCCGTC GAATGCCCTT
TCAAAAATGG GTGTTTGGCA CCTGATTGGC GAAATGACCG CGTCACCGGC CGAGTTTGCA
GTTTCCTGGG CTGTGTTGAT CATTTTGGTC ACCATGTCCT CTCTTTCGTG GTACTGGACA
GTCATAAACA TCTTACGTGC TTTGCGCTTA AAGGGTGCAG GCTACTTGGT CATTAACGCG
TTCTGGAAGG CCAAGACTCC GCAAGAAGCA ATTAGTGCGA TGGAAAAGCA ATCGGCTTCC
GAACCCTTTT CGAAGATTGC TTTGGATGCT TCGCAAGCAG CGGCCCATCA CCAGCGGACA
GAAGGTGGTA ATGCGATGGG ATTAGGGGAA AGGCTAAGTC TCTCGGAGTT TGTCGACCGT
GCGTTACGTC AAGCCGTTAC TCGTGAAAGC AGCAAGCTGC AATCAGGGAT GACATTGCTG
GCGACGGTAG GCGCAACCGC TCCATTCGTA GGTTTGTTGG GTACCGTGTG GGGTATTTAC
AATGCGCTGA TTACTATCGG TGCTACTGGT TCGGCATCCA TTGATGCTGT CGCTGGCCCG
GTAGGGGAAG CACTGATTAT GACTGCAATC GGATTATTCG TTGCGATCCC TGCGGTATTC
GCTTTCAATT TCTTCTCGAA GATCAATAGT TCTATAATCG CTAAATTCGA TACATTTGCG
CATGATCTGC ATGACTTCTT TGCTACGGGT TCGCGTGTAC GATGA
|
|---|
| Protein sequence | MLQDLFIVAT AGGSNPSNAL SKMGVWHLIG EMTASPAEFA VSWAVLIILV TMSSLSWYWT
VINILRALRL KGAGYLVINA FWKAKTPQEA ISAMEKQSAS EPFSKIALDA SQAAAHHQRT
EGGNAMGLGE RLSLSEFVDR ALRQAVTRES SKLQSGMTLL ATVGATAPFV GLLGTVWGIY
NALITIGATG SASIDAVAGP VGEALIMTAI GLFVAIPAVF AFNFFSKINS SIIAKFDTFA
HDLHDFFATG SRVR
|
|---|
| |