Gene Xfasm12_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0009 
Symbol 
ID6120016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp10589 
End bp11254 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content52% 
IMG OID641648100 
ProductTonB protein 
Protein accessionYP_001774692 
Protein GI170729259 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGAAG AACTTATTGT CCATAGGTAT GAGCAGGAGG ATGTGAGCGA TGCTTTAAAT 
TGGCCTCGTA TCCTTGGTAT TGCTTTTGTA ATCGCATTGC ATCTTGCTGC TTTGATGCTA
TTACTGATTC CCGCTGCGTC ACTCAAGGCT CCGCCCGAGA AGCAACGCCT TGCGGCGGTA
ACAATTGTGG ATTCCCCGCC ACCACCACCA CCACCGCCGC CGCAGGAGGA GGAGAAAAAA
CCAGCGCCGC CTATCAAGAC TTTGGCACCA CCACGTCCTG CGCCAGTCCC TCCGCCGCCA
CAGCCTCCAG TGGTGGATGT TCCTCAGCCT CGTCCAAGCG ATGTTGTTGT GCCGCCTGCG
CCGCCTGCGC CGCCGACTCC TCCGAGTGAC ATCAGTGCCA GCGTAGATAT TTCGTCAAAG
AAAATGAACC CACCGAAGTA CCCACCTACT GCTTTACGGG CTGGTATCCA AGGTGAGGTT
GTGTTGATCA TTGACGTAGA TGCTGATGGT AACGTTACTA ATGTGTCCGT CGAGAAATCT
AGCCGTAATC GGGATCTTGA TCGTGCTGCA ATAGATGCCG CTTCTAAATG GAAGTTTAAT
CCTTCAGTGA TCAATGGAAA GAAATCTGCT GGTCGTGTCC GTGTACCGGT CAATTTTTCA
CTATAG
 
Protein sequence
MSEELIVHRY EQEDVSDALN WPRILGIAFV IALHLAALML LLIPAASLKA PPEKQRLAAV 
TIVDSPPPPP PPPPQEEEKK PAPPIKTLAP PRPAPVPPPP QPPVVDVPQP RPSDVVVPPA
PPAPPTPPSD ISASVDISSK KMNPPKYPPT ALRAGIQGEV VLIIDVDADG NVTNVSVEKS
SRNRDLDRAA IDAASKWKFN PSVINGKKSA GRVRVPVNFS L