| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0002 |
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| Symbol | |
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| ID | 6120009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1637 |
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| End bp | 2737 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641648094 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_001774686 |
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| Protein GI | 170729253 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0011847 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTCA GATTACAGCG CGAAACTTTC CTAAAACCAT TAGCTCACGT TGTAAACGTA
GTAGAACGCC GTCAAACACG TTCTATCTTG GCTAATCTCC TAATAAAAGT TAATGAAGAT
CAATTATCCT TAACTGGTAC AGATCTTGAA GTTGAGATGA TTTCAAAAAC AATAATTGAA
GATGCGGAAA GCGGGGAGAT TACTATTCCT GCACGTAAAA TTTATGAAAT CGTTAGGGCT
TTACCGGATG CTAGTCAACT AAGTGTATAT CAATCCGATG ATAAAATTAC CCTCCAAGCT
GGTCGAAGCA AGTTTACCTT AGCTACATTA CCAGCTAATG ATTTTCCATC TATAGATAAA
ATCGAAGTAA CGGAACGTAT TATTATTGCT GAAGTTTTAT TAAAGGAACT CATCGAGCGT
ACTGCTTTTG CAATGGCCCA ACAAGATGTA CGTTATTATT TAAATGGTTT ATTGTTTGAT
TTACGAGACA CTAAATTACG TTGTGTAGCT ACCGATGGCC ATCGTTTAGC ATTGTGTGAA
ACTGAATTAG AACAAGCTAA AGATCTTAAA CGTCAGATTA TTTTGCCGCG TAAAGGCGTA
ATGGAATTAC AACGTTTATT AGAAGGGAGT GATCGCCAAA TTGAGTTAGA AATTGCTCGT
AACCACATTC GAATGAAATC TTTTGATGTA ACGTTTACTT CAAAATTGAT TGATGGTTCT
TTCCCAGATT ATGAAGGAGT GATACCAATC GGTGCTGATC GTGAGGTAAA GGTTGCTCGT
GAGGTTTTAC GTGATGCTCT TCAACGGGCT GCAATTTTAT CTAATGAAAA ATATCGTGGT
GTGCGTATTG AAGTTTCACC TGGTCAGTTA AAAATTAATG CACATAACCC AGAGCAAGAA
GAAGCACAGG AGGAAATTGA GGCCCAAACT ATTGTGGATG GTTTGGCGAT TGGTTTCAAT
GTGAATTATT TGTTAGATGC TTTGTCTTCC TTGCGTGGTG ATTTTGTTAA TATTCAGCTA
CGCGATTCGA ATTCTTCTGC TTTAATCCGT GAATCTAATA GTGAGAAGTC ACTTCAAGTA
GTGATGCCAT TAAGATTATG A
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| Protein sequence | MRFRLQRETF LKPLAHVVNV VERRQTRSIL ANLLIKVNED QLSLTGTDLE VEMISKTIIE
DAESGEITIP ARKIYEIVRA LPDASQLSVY QSDDKITLQA GRSKFTLATL PANDFPSIDK
IEVTERIIIA EVLLKELIER TAFAMAQQDV RYYLNGLLFD LRDTKLRCVA TDGHRLALCE
TELEQAKDLK RQIILPRKGV MELQRLLEGS DRQIELEIAR NHIRMKSFDV TFTSKLIDGS
FPDYEGVIPI GADREVKVAR EVLRDALQRA AILSNEKYRG VRIEVSPGQL KINAHNPEQE
EAQEEIEAQT IVDGLAIGFN VNYLLDALSS LRGDFVNIQL RDSNSSALIR ESNSEKSLQV
VMPLRL
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