| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6981 |
|---|
| Symbol | |
|---|
| ID | 6125890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 1092855 |
|---|
| End bp | 1093892 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641647985 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001774577 |
|---|
| Protein GI | 170735463 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0671274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGATAG GAATCGTTGC AGTCGAAGGG AGCCTGCTGT CTCCCATTAC GGGTCTTGCC
GACCTGTTCT GGATGACCGC CCAGGCATTG CGGGCGCCGC CCGGCGGGGG CGCTCACGGG
CAGCCGGTCG TGTCCGGCTT CGAGACCGTC ATCGCGAGCG CCGACGGGCG GGCGTTGCGG
GACCCGCAGG GCCGTCTGAT TCCGGTCGAT GCCACGTTCG ATGAACTGAC GCAATGCGAT
GTCGCGCTCG TCACCGGCAT GGCGCTCGGT CCCGACCGGT TACCGCCCGT GTCCGCCTCG
ACCACGCAGG CAGCCGCGTG GCTGCGAGCG CGTCATCGTG ACGGCGCGCT GGTGGGCGCG
GCCTGTGCGG GGACCTTCGT GTTGGGCGAG GCCGGCCTGT TGAACGGCAG GCGGTGCACG
ACGACCTGGT GGTTGCACCA TGCGTTCAGG CAGAGGTTTC CCAAAGCGCG CCCGGTGTGG
GGCACCGCCG TGGAAGAACA GGATCGCATC GTCACGACCG GCGGGCCCTT GTCGTGGGTC
GATCTGGCGT TGCACGTCAT CAGGCGGGAA GCAGGGGCCG ACGTCGCTCG CCTGGCCGCC
GATATTTCGG TGGCCGACAC GACGCCGCTG CCGCAGTTGG TATACGCCCC TCGGGGATAC
GTGAATGCTG CCGATCCGCT CCTGCTTCAA GCCGAGCAGA TCGTCCGCCA TGCCAGCCCC
GGCTTGACCG CGGAAGCGCT GGCCGGCGCA CTGGGTCTCA GCGAACGGAC CCTGCATCGT
CGACTGAAGG GCTTGACCAG CGAATCGCCG AAAGGGTTCA TTACGCGCGT CAGAATCGAA
ATGGCTTGTG TGCTGCTGGA GACACCGGGG GCGAGTATCA AGCAGGTCGC GTTGCAATGC
GGTTACGGAG ACGAGACTTC GTTTCGGCGC GCGTTCGGCC AGCTTATCGG CATGACGCCA
GCGGATTACA GGCGCTGGTC AAGCAGGCGG AACACCCGCT CGACCGTCGA TCGTGACCGC
GAGGCTGGCC ACGATTGA
|
|---|
| Protein sequence | MRIGIVAVEG SLLSPITGLA DLFWMTAQAL RAPPGGGAHG QPVVSGFETV IASADGRALR
DPQGRLIPVD ATFDELTQCD VALVTGMALG PDRLPPVSAS TTQAAAWLRA RHRDGALVGA
ACAGTFVLGE AGLLNGRRCT TTWWLHHAFR QRFPKARPVW GTAVEEQDRI VTTGGPLSWV
DLALHVIRRE AGADVARLAA DISVADTTPL PQLVYAPRGY VNAADPLLLQ AEQIVRHASP
GLTAEALAGA LGLSERTLHR RLKGLTSESP KGFITRVRIE MACVLLETPG ASIKQVALQC
GYGDETSFRR AFGQLIGMTP ADYRRWSSRR NTRSTVDRDR EAGHD
|
|---|
| |