Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6971 |
Symbol | |
ID | 6125880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 1081519 |
End bp | 1082649 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641647975 |
Product | porin |
Protein accession | YP_001774567 |
Protein GI | 170735453 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.829977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA AAGTCATCTC GGCGATCTCT CTGTCGATTA CCGCCTACGC GGCCGGCGCG CATGCGCAAA GCTCGGTCAC GCTTTACGGC ATCGTCGATA CCGGTATCGC ATACATTCAC AACAGCGGCG GACAAGCGTC GCAATGGAAG ATGTCGGCCG GTAATCTGTC CGGAAATGAA TGGGGGCTCA AGGGCACCGA AGATCTCGGG GGAGGCTTGT CGGCGAGCTT TCAGCTCGAG AACGGCTTCG ATCTCGGCTC GGGTCAATTG CAGAACGACG GCCGCATGTT CGGCCGGCAA GCGTTCGTCG GGCTGGGCAG CACGCGTTTC GGGACGGTCA CGCTCGGTCG CCAATACGAT CCGGTGACCG ATCTGGTTCA GCCGATCACC GCCGATTCGT ACAGCGGCCT GTTCGCACCG CCGGGCGATA TCGACAATTA CGACGACAGC GCGCGTTTCA ATAGTGCGGT CAAGTGGACG AGCCCGTCGT GGGGCGGTGT CACGGTCGAG ACCATGTATG CGTTCGGCGG CGTGGCGGGA TCGACGGGCT CCGGGCAAAG CTGGTCGGCC GCGGCGGCCT ACAGCGGCGG CGCGCTCAGC GTGGCGGGCG GGTTCCTGCA CGTGGACAAC GGCAACGCCA GGACGTCGGC ACGCGGCACG TCGAGCGCGG ACAGTTTCTT CAACAGTGCC GTCAATGCGG CGTACGCGAC TGCCCGCGGC ATCGATATCG GTCGGATCGG CGCACAGTAC GTCGTTGGGC CGGTTACGGC CGGCGCGGCG TACTCGTACA CGCGCTATAC GTCGGACGGC GCGTCGACGT TCGCGGGTTC GCAGCACTTC CAGAACGGCT CCGTGTTCGC GAGCTGGATG GCGACGCCGA CGTTCCAGGT GATCGGCGGC TACAACTACA CGCGTTCGGG CGGCCATTCG TCGGCGACCT ATCAGCAGGT CAATCTCGGC GTCGACTATT TGCTGAGCAA ACGGACCGAC GTCTATGCGA CGGCCGGCTA TCAGCATGCG AGCGGCGACA ATGGCCAGGG GAGCGCTCAA GCGGTGATCG GCTCTTACGA CGTCAATTCG GGCGCGAATT CGCAGATCGT CGCGATCGTC GGCCTGCGCC ACAAGTTCTG A
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Protein sequence | MKRKVISAIS LSITAYAAGA HAQSSVTLYG IVDTGIAYIH NSGGQASQWK MSAGNLSGNE WGLKGTEDLG GGLSASFQLE NGFDLGSGQL QNDGRMFGRQ AFVGLGSTRF GTVTLGRQYD PVTDLVQPIT ADSYSGLFAP PGDIDNYDDS ARFNSAVKWT SPSWGGVTVE TMYAFGGVAG STGSGQSWSA AAAYSGGALS VAGGFLHVDN GNARTSARGT SSADSFFNSA VNAAYATARG IDIGRIGAQY VVGPVTAGAA YSYTRYTSDG ASTFAGSQHF QNGSVFASWM ATPTFQVIGG YNYTRSGGHS SATYQQVNLG VDYLLSKRTD VYATAGYQHA SGDNGQGSAQ AVIGSYDVNS GANSQIVAIV GLRHKF
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