| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6962 |
|---|
| Symbol | |
|---|
| ID | 6125871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 1070291 |
|---|
| End bp | 1071220 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641647966 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001774558 |
|---|
| Protein GI | 170735444 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTT CCCCAGGAGG CGGCATCCAT GCCGGAGCGC CCGGGCAGCG GCGACGCTGG
CTGCGCGCGA GCCCCGCGGC CCTTACGCTG GCGCCGAGTG TCGTCGTACT TTTGATTGCC
GTCTATGTGT TCATCGGCTG GTCGATCGTC ATCTCGTTCA CCAGTTCGAA GTTCGCGCCG
AACTACGACT TCGTCGGTCT TGCGCAGTAT GCAAGGCTAT GGGATTCGGA CCGATGGAAT
GTCGCGGTAA CCAACCTCGG TTTGTTCTCG ATCGCGTTCA TGCTGATCTC GCTCGTGCTC
GGCCTGCTGC TCGCGATTTT TCTCGACCAG AAGGTGCGGG GCGAGGGGGC GTTCCGGATG
ATCTATCTGT ATCCGATGGC CGTGTCGTTG ATCGTGACCG GCACCGCGTG GAAGTGGATC
CTGAATCCCG GCCTCGGGCT GGAAAAGCTG CTGCAGGATT TCGGCGTCAC CGGCATCCAT
GTCAACTGGC TGATCGACCC GCAGATGGCG GTCTATACGC TTGTCGTCGC CGCCGTCTGG
CAAACCGCGG GCTTCGTGAT GGCGATCTTC CTGGCGGGCC TGCGCGGGAT CGACGGCGAA
ATCATCAAGG CGGCGCGCAT GGAAGGCGCC GGCACGCTGC GCATCTATCT GACCATCATC
ATCCCGATGC TGCGCGCGTC CGTATTCAGC GTGGTCGTGA TCCTGATCTA CCAGGCGGTG
CGGTCGTTCG ACCTTGTCGT GGCGCTGACG AACGGCGGCC CGGGTTTCTC GAGCGACCTG
CCGACGACGT TCATGTACAA CCTGACGTTC AGCCGCGGCC AGCTCGCGCA GGGCGCCGCC
AGCTCCGTCA TGATCCTGCT CGTCGTGGTC GCCCTTACCG TCCCGTATCT CTACTCGGAG
TTCAAGCGTG AACACAACGA CAGTCTCTGA
|
|---|
| Protein sequence | MSFSPGGGIH AGAPGQRRRW LRASPAALTL APSVVVLLIA VYVFIGWSIV ISFTSSKFAP
NYDFVGLAQY ARLWDSDRWN VAVTNLGLFS IAFMLISLVL GLLLAIFLDQ KVRGEGAFRM
IYLYPMAVSL IVTGTAWKWI LNPGLGLEKL LQDFGVTGIH VNWLIDPQMA VYTLVVAAVW
QTAGFVMAIF LAGLRGIDGE IIKAARMEGA GTLRIYLTII IPMLRASVFS VVVILIYQAV
RSFDLVVALT NGGPGFSSDL PTTFMYNLTF SRGQLAQGAA SSVMILLVVV ALTVPYLYSE
FKREHNDSL
|
|---|
| |