Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6951 |
Symbol | |
ID | 6125860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 1057092 |
End bp | 1057988 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641647955 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001774547 |
Protein GI | 170735433 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase [TIGR00683] N-acetylneuraminate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.522277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATTG CGTTCAAGGG AATCGTTCCC GCGCTGATCA CGCCGATGAC GGCGAACGAG AACGTCGATG AAGACGGCCT GCGCGCGCTG GTCGAGCGGC TCATCGAGGC CGGCGTGCAC GGGCTGTTCG TGCTCGGCAC CAACGGTGAA TTCATCGCGC TGAATGAAGA AGAGAAGCTG CGCATCGCGC GGATCGCGGT CAGTCAGGCA CGTTCGCGCG TGCCGGTCAT CGCGGGAACC GGTGCGTATG CGACGCGCGA CGTGATCGGC CTGAACCGGA AGATGGCCGA TGCCGGCGTC GATGCCGTGT CCGTGATCAC GCCGTATTTC AACGGCGCCA CGCAGCCGGA ACTCTACGCG CACTACAAGC AGATCGCCGA CGCGACGCCG CTGCCGGTCA TGCTTTACAC GATTCCAGCG AAAGCGGGCG TCACGCTGAC CGTCGATACG GTGCGTCGCC TCGCGGAGAT TCCGAACATC CGCGGCATCA AAGATAGCGG CGGCGACTTC GACCGGTTGC TGCAACTGAT CGACCTGCGG CGCGACGATT TCGCGGTCTT CACCGGCACC GACTCGATGA TCCTCTGGAC GCTGATCGCC GGTGGCGACG GCGCGGTCGC CGCGACGACC AACGCCGTCC CGCATGTCGT GATGTCGATC TGGAACAAGT TCCACGCCGG CGATATCGCC GGCGCACGCA CCGCGCAGGA ATCGCTGCGC GCGCTGCGCG ACGCATTCGC ACTCGGCACG ATGCCCGTCG TGCTGAAAAC CGCCGCGCAG ATGCTCGGGA TGCCGGCCGG CCCCGCGCGC TCGCCCGCGC AGCCGCTCGA TGCCCATGCT CGCGAGCGCC TCGCGCAAGC GCTTTCCGTC TACCGCGACG CCGCGCGCGG CCACTGA
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Protein sequence | MSIAFKGIVP ALITPMTANE NVDEDGLRAL VERLIEAGVH GLFVLGTNGE FIALNEEEKL RIARIAVSQA RSRVPVIAGT GAYATRDVIG LNRKMADAGV DAVSVITPYF NGATQPELYA HYKQIADATP LPVMLYTIPA KAGVTLTVDT VRRLAEIPNI RGIKDSGGDF DRLLQLIDLR RDDFAVFTGT DSMILWTLIA GGDGAVAATT NAVPHVVMSI WNKFHAGDIA GARTAQESLR ALRDAFALGT MPVVLKTAAQ MLGMPAGPAR SPAQPLDAHA RERLAQALSV YRDAARGH
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