| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6950 |
|---|
| Symbol | |
|---|
| ID | 6125859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 1055563 |
|---|
| End bp | 1056489 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641647954 |
|---|
| Product | ribokinase |
|---|
| Protein accession | YP_001774546 |
|---|
| Protein GI | 170735432 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | [TIGR02152] ribokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACAA TCGCCGTCAT CGGCAGCAAC ATGGTCGACC TCGTGACCTA TGTCGCGCGC
ATGCCCGCCC GGGGCGAAAC GCTGGAGGCC CCGAACTTCG AGCTCGGCTG CGGCGGCAAG
GGCGCGAACC AGGCCGTCGC GGCCGCGCGC CTCGGCGCGC GCGTCGTGAT GGTCACGAAG
GTCGGCGACG ACGTGTTCGC CGACAACACG ATCCGCAACT TCGAACGCGA AGGCATCGAC
ACCACGCACG TGCGCAAGGT CGCCGGCGTG CCGAGCGGCG TCGCGCCGAT CTTCGTCGAG
CCCGATTCGA GCAACAGCAT CCTGATCGTC AAGGGCGCGA ACCGCCACCT GCAGCCGGCC
GACATCGACG CGGCCGCGCC GATGCTCGCC GAATGCGCGC TGATCGTGCT GCAGCTCGAG
ATCGAGCTCG ACACCGTCTA TCACGCGATC GAATTCGGCG CGCGGCACGG CATTCCGGTG
CTGCTGAATC CCGCGCCGGC GGTCGCCGAC CTCGATTTCG AACGCATCCG TTCCGTCGAA
TTCTTCGTGC CGAACGAAAC CGAGCTCGCG ATCGTGTCGG GCCTGCCGGT CGATTCGCGC
GAGAGCGCCG CCCGCGCCGC CGAAGCGCTG GTCGCACGCG GGCTCAAGCA CGTGCTCGTC
ACGCTCGGCA GCAACGGTTC GCTGCTGGTG TCGCGCGACG GCGTGCATCA CGTGCCGGGC
GTCCCGGTCG ACGCGCGCGA CACGACGGGC GCCGGCGACG CGTACATCGG CTGCTTCGCG
CGCTGCTATG CCGCGTCGCG CGACGCGGTC GATGCGATGC GCCACGCGTC CGCGTACGCC
GCGCATTCGG TCACGGGCCT CGGCACGCAG AAATCGTACG CCGACGCCGC GACGTTCGAA
CGCTTCCTCC GCGCCGCCGG CTTCTGA
|
|---|
| Protein sequence | METIAVIGSN MVDLVTYVAR MPARGETLEA PNFELGCGGK GANQAVAAAR LGARVVMVTK
VGDDVFADNT IRNFEREGID TTHVRKVAGV PSGVAPIFVE PDSSNSILIV KGANRHLQPA
DIDAAAPMLA ECALIVLQLE IELDTVYHAI EFGARHGIPV LLNPAPAVAD LDFERIRSVE
FFVPNETELA IVSGLPVDSR ESAARAAEAL VARGLKHVLV TLGSNGSLLV SRDGVHHVPG
VPVDARDTTG AGDAYIGCFA RCYAASRDAV DAMRHASAYA AHSVTGLGTQ KSYADAATFE
RFLRAAGF
|
|---|
| |