Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6914 |
Symbol | |
ID | 6125825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 1016950 |
End bp | 1017789 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641647920 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001774512 |
Protein GI | 170735398 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.851419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATC CAGCCGTTTG GTTCATCACG GGCGTTTCGT CCGGCTTTGG GCGGTCCCTT GCGGAAGCGG CCCTCGCACG CGGCGACAAG GTGGTCGGCA CCGTGCGCAA CACCGCGCAG CTCACGCCGT TCGAAAATCT CGCGCCAGGG CGAGCCTATG GCGTACTGCT CGATGTCACC GACACCACGT CGGTGCCTGG CGCCGTCGAG CAGGCCATTA GTCGCGCAGG CACGATCGAC GTTCTCGTGA ACAATGCTGG CTACGGACTG TTCGGTGCAT TCGAAGAAAT CTCCGATACC GAAGCTCGGC AGCTATTCGA TACCAACGTG TTCGGCACGG CCAATGTGAT CCGCGCCGTT CTGCCCCATT TTCGTGAGCG AAAGCGCGGG CACATCGTGA ACTTCTCGTC GCTGGCCGGT GTAATCGGCA TCACGGGTTG CAGCTTCTAT TGCGCGTCGA AGCATGCAAT AGAAGGCCTG TCCGAATCGC TCTCGCGAGA ATTGAAGCCG TTTGGCATTC ACGTGACCAT CGTCGAACCC GGCGGTTTTC GCACGAATTT TTCGGGCGGC TCACTGAAGT GGAGCGAGAT CGAATCCCCT GCCTACGCGG AAACCGTGGG CAAGATGCGC CAGATGATGC GTGGCTACCA CGGCACGCAG GCAGGGGATC CAGCCAAGGC AGCCGCAGCC GTCGTGCGTG CGGTGACGTC AGAAAACCCG CCGCTGCGGT TGCCGCTCGG TCCGGATGCC GTCGACGCCG TCCAAAAGAA ACTCGCGTCC GTACAGGACA ATCTGGAAGC GTGGCTCGAA GTATCGAGTT CCACCGACTT CGATCGTTAA
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Protein sequence | MTNPAVWFIT GVSSGFGRSL AEAALARGDK VVGTVRNTAQ LTPFENLAPG RAYGVLLDVT DTTSVPGAVE QAISRAGTID VLVNNAGYGL FGAFEEISDT EARQLFDTNV FGTANVIRAV LPHFRERKRG HIVNFSSLAG VIGITGCSFY CASKHAIEGL SESLSRELKP FGIHVTIVEP GGFRTNFSGG SLKWSEIESP AYAETVGKMR QMMRGYHGTQ AGDPAKAAAA VVRAVTSENP PLRLPLGPDA VDAVQKKLAS VQDNLEAWLE VSSSTDFDR
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