Gene Bcenmc03_6743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6743 
Symbol 
ID6125664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp830532 
End bp832613 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content64% 
IMG OID641647759 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_001774351 
Protein GI170735237 
COG category[T] Signal transduction mechanisms 
COG ID[COG3300] MHYT domain (predicted integral membrane sensor domain)
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGA CCAGTTATAA CGCGTTGCTC GTTCTTCTTT CGCTGCTGAT TGCCATATTG 
GCGTCCTACA CCGTGCTGGA CATGGCCGGG CGCATCAAGA GCGCTCAGGG GCACGCCGCA
CAGTGGTGGC TGGTCGGCGC GGCTTGCGTG ATGGGCACGG GCATCTGGTC GATGCATTTC
GTCGGCATGC TTGCTTTCGC GTTGCCGATT CCATTGGGAT ACGATCCGGC CATTACCTTG
CTGTCGTTGC TGATCGCGAT CGTCTGCTCC ACGGGCGCAC TGTGGCTCGT CTGCCGGGAC
ACGCTGAAGT GGCGCCGGCT GTGCGGCGGG GCCATGTTGA TGGGCGCCGG CGTAGCGGGT
ATGCATTACA CGGGCATGGC TTCGATGCGC ATGTCGCCCG GCATCCGCTA CGACCCGTTG
CTCGTTTGCC TGTCGGTCGC GATTGCCGTG GTCGCGTCGG GCGCCGTGCT GTGGATCGTA
TTCATCCGGC GTGCCAACTC GTCGCGCGTG CGCCTGCTCA ACCTGGGATC GGCAGTCCTG
ATGGGCGCCG CCATCGCCGG CATGCACTAT ACCGGGATGG CCGCCGCCCG CTTCCTGCTG
GGCAGCATCT GCGGGGCAGC CGGCTCCCGC ATGGACGCCG GCTGGCTGGC ACTCGTCATC
ATCGTGGCCA CGTTGGCCAT ACTCGCGATC GCGTTGATCG TCTCGATCCT CGATCTGCGT
CTGGAGGCCC GCACGGCGGT ACTGGCCACG TCACTGGCCG AAGCCAACCA GGAATTGACG
TATCTGGCGC TGCACGACAA CCTCACCAAG CTGCCCAATC GCGTGCTGCT CGAGGACCGG
ATCGATCAGG CGATCCAGGG CGCCGACCGC GAGCACGGGA GCTTCGCGCT GATGTTCATG
GACCTCGATG GATTCAAGGC GGTCAACGAC GCCTATGGTC ATCACGTCGG CGATCTGTTG
CTGGTCGACG TGGCGCGGCG CATCGGCGCG AACCTGCGTT CGCAGGACAC GATTGCCCGC
CTGGGGGGCG ACGAATTCGT GCTGGCCGTG GCAGTGGACG AGCCCGCGGA CGCGGCCGAC
GTGGCGGACA AGATATTGGC GGTGATCCGG AAACCGTTCC GCGTGGCCGA ACACGAATTG
CGCGTGTCGG CCAGTATCGG CATTGCGCTC TATCCCGGCA ACGGCAGCGA TTTCCGCGAC
CTGATGACCA ACGCCGATGC AGCGATGTAT CACGCCAAGG CACTCGGCCG GAACGCGTAC
TGCCTCTTCG AGGCATCGAT GAACGCGAAT GTCCGCGAGC ACCTGAAAAT CGTGCAGGAG
CTCCGTCTGG CGCTGGAGCG GCGTGAACTG GTCCTGCATT ACCAACCGAA GTTCGACGTC
CCGCACGGAC CGATCATCGG CGTCGAGGCG CTGTTGCGAT GGATGCACCC GACGCGCGGT
CTCATTTCAC CCGATCAGTT CATCTCGATC GCGGAAAAGA CCGGCTTGAT CGTGCCGATC
GGCGAGTGGG TGCTGGACGA GGCCTGCCGG CAGATGCGCG TATGGTGCGA TGCAGGTCGA
ACCGACTGGA CGATGGCCGT CAACCTGTCG CCGCTGCAAT TCGGTCACGC GAGCCTGATC
CGGGTCGTGG AGGCCACATT GCAGCGGCAC GCGCTGGAGC CGCACTGCCT GACGTTGGAG
ATCACCGAAT CGACCGCGAT GCGCGATGCG GACGCCAGCT TGAGAATCCT GCAGCAGCTT
CACGACATGG GCGTGCGTAT TTCCATCGAC GACTTCGGAA CGGGTTATTC AAGCTTGCTG
TATCTCAAAC GCTTGCCGGC CAGCGAGCTC AAGATCGACC GGGGCTTCAT TCGCGATCTC
GAACACGATA CCGAGGATGC CGCGATCATT TCGGCGATCG TCGCGCTCGG CCGGGCACTC
GACCTGAAGA TCGTCGCGGA GGGCGTTGAA ACGACGGCGC AGCAGCAGTT CCTGACCCGC
CTCGGTTGCA ACTCGCTGCA GGGCTTCCTG CTCGGACGCC CGATGCCGGC GGATCACTTC
ATCGAAATGA CCGCGCAAGG TACTGCGATC AAGCCTGTTT GA
 
Protein sequence
MLPTSYNALL VLLSLLIAIL ASYTVLDMAG RIKSAQGHAA QWWLVGAACV MGTGIWSMHF 
VGMLAFALPI PLGYDPAITL LSLLIAIVCS TGALWLVCRD TLKWRRLCGG AMLMGAGVAG
MHYTGMASMR MSPGIRYDPL LVCLSVAIAV VASGAVLWIV FIRRANSSRV RLLNLGSAVL
MGAAIAGMHY TGMAAARFLL GSICGAAGSR MDAGWLALVI IVATLAILAI ALIVSILDLR
LEARTAVLAT SLAEANQELT YLALHDNLTK LPNRVLLEDR IDQAIQGADR EHGSFALMFM
DLDGFKAVND AYGHHVGDLL LVDVARRIGA NLRSQDTIAR LGGDEFVLAV AVDEPADAAD
VADKILAVIR KPFRVAEHEL RVSASIGIAL YPGNGSDFRD LMTNADAAMY HAKALGRNAY
CLFEASMNAN VREHLKIVQE LRLALERREL VLHYQPKFDV PHGPIIGVEA LLRWMHPTRG
LISPDQFISI AEKTGLIVPI GEWVLDEACR QMRVWCDAGR TDWTMAVNLS PLQFGHASLI
RVVEATLQRH ALEPHCLTLE ITESTAMRDA DASLRILQQL HDMGVRISID DFGTGYSSLL
YLKRLPASEL KIDRGFIRDL EHDTEDAAII SAIVALGRAL DLKIVAEGVE TTAQQQFLTR
LGCNSLQGFL LGRPMPADHF IEMTAQGTAI KPV