Gene Bcenmc03_6742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6742 
Symbol 
ID6125663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp829224 
End bp830297 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content65% 
IMG OID641647758 
Productporin 
Protein accessionYP_001774350 
Protein GI170735236 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CACGACAGGC CGGGGTGCGC GTTGCCGCCC GGCGCGTTGT CGGTACGCTC 
GGCATGACGG CGATATTCAG CGCCGGCCTG GCATCGACTT TCGTCGGAGC GCGCGCGGAT
AGCGGCTCCC AGGTCCAGCT TTATGGCCTG CTCGGCACCT ACGTCGGGAG CATCAAACGC
AGCGACACGC CGCAGGCCGC GGTACAGATG GGGAGCGGCG GACTGACCAC ATCGTTCTGG
GGAATCCGCG GCAAGGAAGA CCTTGGCGGC GGCGTGGGCG CCATTTTCGT TCTCGAAAGC
TTCTTTCAAC CCGCGAACGG CGCGCTCGGG CGCAGTACGG CGGACCCGTT CTGGTCACGC
AATGCGTACG TGGGCTTTCA AGGCGACTTC GGGCAGGTGA CCTTCGGGCG ACAAAGAAAC
CCGGCCTATA CGGCCGAATC CCTCGTCAAT CCGTTCGGAT CCTCGACCGT CTTCTCTCCA
CTCGTCCTGC AGACGTTCGT GACCAACTAT GGCGGGACGA TCATCGGCGA TACGGTGTGG
AACAACACCG TCAAGTACAC GACGCCCGAC TTCAAGGGGT TCGCCGCCAC CGTCATCTAC
GGTCTTGGCG GCGTGGCGGG TTCGCCCGGC GTCGGTAATC TCGGCGTTCA CCTGAGCTAT
CAAGGGCATG GCCTCACGGC CGTGCTGTCC GGCCAGCGCG TGCGGTATAC CGCGGCAGGG
CCGGTCGGCG CGCAGTACGC CTATCTGGCC GGCGCGGCAT ACGACTTCAA GCTCGTCACG
CTCTACGGCG CGTGGGCGAT GACGAGCGAC GCGAGTACGC CGACCGGCAG CCGCACCTAC
GAAGCCGGCT TGTCGATCCC GTTGTCACCA GCCGACTTCC TGCTCGCAGA GTGGGCGCGC
ACGAAGCGGT CCGGCGCTAC CCCAGGGGCC GGCAGCCTGC GGAACACCGC GTCCGTCGGC
TACAACCACT TGCTGTCGAA ACGGACGGAC CTCTACGCGG TTTACGCTTA CGACAAACTG
AGCGCTCACC CCACCGGCAA CACGTTTGCG GTGGGCATTC GCCACACGTT CTGA
 
Protein sequence
MKKTRQAGVR VAARRVVGTL GMTAIFSAGL ASTFVGARAD SGSQVQLYGL LGTYVGSIKR 
SDTPQAAVQM GSGGLTTSFW GIRGKEDLGG GVGAIFVLES FFQPANGALG RSTADPFWSR
NAYVGFQGDF GQVTFGRQRN PAYTAESLVN PFGSSTVFSP LVLQTFVTNY GGTIIGDTVW
NNTVKYTTPD FKGFAATVIY GLGGVAGSPG VGNLGVHLSY QGHGLTAVLS GQRVRYTAAG
PVGAQYAYLA GAAYDFKLVT LYGAWAMTSD ASTPTGSRTY EAGLSIPLSP ADFLLAEWAR
TKRSGATPGA GSLRNTASVG YNHLLSKRTD LYAVYAYDKL SAHPTGNTFA VGIRHTF