Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6742 |
Symbol | |
ID | 6125663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 829224 |
End bp | 830297 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641647758 |
Product | porin |
Protein accession | YP_001774350 |
Protein GI | 170735236 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CACGACAGGC CGGGGTGCGC GTTGCCGCCC GGCGCGTTGT CGGTACGCTC GGCATGACGG CGATATTCAG CGCCGGCCTG GCATCGACTT TCGTCGGAGC GCGCGCGGAT AGCGGCTCCC AGGTCCAGCT TTATGGCCTG CTCGGCACCT ACGTCGGGAG CATCAAACGC AGCGACACGC CGCAGGCCGC GGTACAGATG GGGAGCGGCG GACTGACCAC ATCGTTCTGG GGAATCCGCG GCAAGGAAGA CCTTGGCGGC GGCGTGGGCG CCATTTTCGT TCTCGAAAGC TTCTTTCAAC CCGCGAACGG CGCGCTCGGG CGCAGTACGG CGGACCCGTT CTGGTCACGC AATGCGTACG TGGGCTTTCA AGGCGACTTC GGGCAGGTGA CCTTCGGGCG ACAAAGAAAC CCGGCCTATA CGGCCGAATC CCTCGTCAAT CCGTTCGGAT CCTCGACCGT CTTCTCTCCA CTCGTCCTGC AGACGTTCGT GACCAACTAT GGCGGGACGA TCATCGGCGA TACGGTGTGG AACAACACCG TCAAGTACAC GACGCCCGAC TTCAAGGGGT TCGCCGCCAC CGTCATCTAC GGTCTTGGCG GCGTGGCGGG TTCGCCCGGC GTCGGTAATC TCGGCGTTCA CCTGAGCTAT CAAGGGCATG GCCTCACGGC CGTGCTGTCC GGCCAGCGCG TGCGGTATAC CGCGGCAGGG CCGGTCGGCG CGCAGTACGC CTATCTGGCC GGCGCGGCAT ACGACTTCAA GCTCGTCACG CTCTACGGCG CGTGGGCGAT GACGAGCGAC GCGAGTACGC CGACCGGCAG CCGCACCTAC GAAGCCGGCT TGTCGATCCC GTTGTCACCA GCCGACTTCC TGCTCGCAGA GTGGGCGCGC ACGAAGCGGT CCGGCGCTAC CCCAGGGGCC GGCAGCCTGC GGAACACCGC GTCCGTCGGC TACAACCACT TGCTGTCGAA ACGGACGGAC CTCTACGCGG TTTACGCTTA CGACAAACTG AGCGCTCACC CCACCGGCAA CACGTTTGCG GTGGGCATTC GCCACACGTT CTGA
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Protein sequence | MKKTRQAGVR VAARRVVGTL GMTAIFSAGL ASTFVGARAD SGSQVQLYGL LGTYVGSIKR SDTPQAAVQM GSGGLTTSFW GIRGKEDLGG GVGAIFVLES FFQPANGALG RSTADPFWSR NAYVGFQGDF GQVTFGRQRN PAYTAESLVN PFGSSTVFSP LVLQTFVTNY GGTIIGDTVW NNTVKYTTPD FKGFAATVIY GLGGVAGSPG VGNLGVHLSY QGHGLTAVLS GQRVRYTAAG PVGAQYAYLA GAAYDFKLVT LYGAWAMTSD ASTPTGSRTY EAGLSIPLSP ADFLLAEWAR TKRSGATPGA GSLRNTASVG YNHLLSKRTD LYAVYAYDKL SAHPTGNTFA VGIRHTF
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