Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6680 |
Symbol | |
ID | 6125602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 754563 |
End bp | 755801 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641647692 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001774289 |
Protein GI | 170735175 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.231623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.121297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGTCG AACGGGTTCC ATACCGCTTA ATCACTGCCG CAACGGCCGC CGTTTTCCTG GCCGCGTGCG GGAAAAAAGA ATCGGCGCCG CCGCCGCAAA CGCCGGAAGT CGGCGTCGTC ACCGTCCAGC CGCAAGCCGT GCCGGCGGTG ACCGAACTGC CGGGCCGCAC CAGCGCGTTC CTGGTCGCGC AAGTGCGTGC GCGGGTCGAC GGCATCGTGC TGCGCCGCGA ATTCACTGAA GGCACCGACG TCAAGGCCGG TCAGCGCCTG TACAAGATCG ATCCGGCGCC GTACATCGCG GCCCTGAACA GCGCGAAGGC GACGCTCGCG AGGGCGCAGG CGAACCTCGT CACGCAGAAC GCGCTGGTCG CGCGCTACAA GGTGCTGGTG GCCGCGAACG CGGTCAGCAA GCAGGATTAC GACAACGCGG TCGCCACCCA AGGCCAGGCC GCGGCGGACG TCGCGGCCGG CAAGGCGGCG GTCGATACCG CGCAGATCAA CCTCGGCTAT ACGGATGTCG TCTCGCCGAT CAGCGGCCGC GTCGGCATCT CGCAAGTGAC GCCGGGCGCA TACGTGCAGG CGAGCCAGGC GACGCTGATG TCGACCGTGC AGCAGCTCGA TCCGGTGTAC GTCGACCTCA CGCAGTCGAG CCTCGAAGGG CTGAAGCTGC GCCAGGACGT GCAGAGCGGC CGTCTGAAGA CGAGCGGCCC GGGCGCGGCG AAGGTGTCGC TGATCCTCGA GGATGGCAAG ACCTACTCGG AGCCGGGCAA GCTGCAGTTC TCGGACGTGA CGGTCGACCA GACCACCGGC TCGGTGACGA TCCGCGCGGT GTTCCCGAAC CCGAACCGCG TGCTGCTGCC GGGCATGTTC GTGCGCGCAC GGATCGAGGA AGGCGTGAAC GAGAACGCGT TCCTGGTGCC GCAGATCGGC GTCACGCACG ATCAGAAGGG GCAGGCGATC GCACTCGTCG TGACCGCGGC CAGCAAGGTC GAGATGCGTC CGTTGACGAC GACCGGCACG TACGGTCAGA ACTGGATCGT CGAAGGCGGT CTGCAGGCGG GCGATCACGT GATCGTGCAA GGCGTCGACA AGGTGCGCCC GGGCGCGACC GTGAAGACCG TCGCCGCGCA GCTCGCCCCG GCGCCGGACG CCGCATCCGC CACGTCGGCA GGCGCCGCGC CGGCGAGTAC CGCGACGAGT GCCGCAGCGA GTTCGGTCGC CGCGTCGAGC GCGCAATAA
|
Protein sequence | MRVERVPYRL ITAATAAVFL AACGKKESAP PPQTPEVGVV TVQPQAVPAV TELPGRTSAF LVAQVRARVD GIVLRREFTE GTDVKAGQRL YKIDPAPYIA ALNSAKATLA RAQANLVTQN ALVARYKVLV AANAVSKQDY DNAVATQGQA AADVAAGKAA VDTAQINLGY TDVVSPISGR VGISQVTPGA YVQASQATLM STVQQLDPVY VDLTQSSLEG LKLRQDVQSG RLKTSGPGAA KVSLILEDGK TYSEPGKLQF SDVTVDQTTG SVTIRAVFPN PNRVLLPGMF VRARIEEGVN ENAFLVPQIG VTHDQKGQAI ALVVTAASKV EMRPLTTTGT YGQNWIVEGG LQAGDHVIVQ GVDKVRPGAT VKTVAAQLAP APDAASATSA GAAPASTATS AAASSVAASS AQ
|
| |