Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6621 |
Symbol | |
ID | 6125544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 684851 |
End bp | 686023 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641647634 |
Product | porin |
Protein accession | YP_001774231 |
Protein GI | 170735117 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.112273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.393887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGA TCCGTTCATT CGCGCTGCTC GCCCTGCCGG CCGCGCTCGT CGCCGCCGGC GCGCACGCAC AAAGCAGCGT CACGCTGTAC GGCATCGCCG ACGCGGGCAT CGCATACGTC CACAACGCGC AGAACGCGAA CGGCGGCAAC GCGTCGAGCC TCGTGAAGTT CAGCAGCGGC AACCTGTCGG GCAGCCGCTG GGGGCTGCGC GGCATCGAGG ATCTCGGCAG CGGCCTGTCC GCGCTGTTCC AGCTCGAGAA CGGCTTCAAC ATCGGCACCG GCGCGCTCGG CCAGGGCGGG CGCGAATTCG GCCGCAAGGC CGTCGTCGGC CTCGCGAGCA GCACCTACGG CACCGTGACG CTCGGCCGCC AGTACGACCC GATCGTCGAT CTCGTGCAGG GCCTCACGCA GGACAACTAC TTCGGCGGCG TGTTCGCGAC GCCGGGCGAT CTCGACAACT ACGACAACAG CCTGCGCGTC AGCAACTCGG TGAAATACAC GAGCCCGCTG ATCTCCGGCT TCCAGTTCGA GGCGCTGTAC GGCTTCGGCG GCGTCGCGGG CGCGACCGGC AGCGGCCGCA CGTACAGCTT CGGCGCGAGC TATGCGAACG GCCCGCTGTC GCTCGGCGCC GGCTACTTCT ACGCGAACGG CGGCACGACG GTCGCGAACG GCGTGCGCAC GTGGTCGAGC AGCTCGGACA CGCTGTTCAA CACCGTGATC AACCAGGGCT TCTCGAGCGC GAAGTCGATC CAGATCGTGC GCGTGGCCGG CCAGTACGTG GCCGGGCCGG CGACCTTCGG CCTCGCGTAT TCGAACACGC AGTACGGCGC GGACACGCTG TCGGCATTCA GCCAGAACGC GAAGTTCAAC AACGGCTCGG CATTCTTCAA CTGGCAGTTC TCGCCGGCAC TGCGCGCGGG CGTCGGCTAC AACTACACGT CGCTGACGGG CCCGGCTTCC GCGCACTACA ACCAGGTCAA CCTCGGCGCG GATTACGCGC TGTCGAAACG CACCGACCTG TATGCGCTGT TCGGCTATCA GAAGGCGAGC GGCAACACGC TCAACGCGAG CGGAGCGACC GTGAAGGCGG CCGCGTCGGT CGGCTCGTAC GGCGTGAACT CGGGCACCGA TACGCAGGAA CTCGCGATCG TCGGCATTCG CCACAAGTTC TGA
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Protein sequence | MKQIRSFALL ALPAALVAAG AHAQSSVTLY GIADAGIAYV HNAQNANGGN ASSLVKFSSG NLSGSRWGLR GIEDLGSGLS ALFQLENGFN IGTGALGQGG REFGRKAVVG LASSTYGTVT LGRQYDPIVD LVQGLTQDNY FGGVFATPGD LDNYDNSLRV SNSVKYTSPL ISGFQFEALY GFGGVAGATG SGRTYSFGAS YANGPLSLGA GYFYANGGTT VANGVRTWSS SSDTLFNTVI NQGFSSAKSI QIVRVAGQYV AGPATFGLAY SNTQYGADTL SAFSQNAKFN NGSAFFNWQF SPALRAGVGY NYTSLTGPAS AHYNQVNLGA DYALSKRTDL YALFGYQKAS GNTLNASGAT VKAAASVGSY GVNSGTDTQE LAIVGIRHKF
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